Evidence map›Paper›PMID 36421137›Full record

ArticleBiosensors2022

Peptide Selection of MMP-1 for Electrochemical Sensing with Epitope-Imprinted Poly(TPARA-

Mei-Hwa Lee, Cheng-Chih Lin, Piyush Sindhu Sharma, James L Thomas, Chu-Yun Lin, Zofia Iskierko, Paweł Borowicz, Chien-Yu Lin, Wlodzimierz Kutner, Chien-Hsin Yang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Biosensors, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Mei-Hwa LeeDepartment of Materials Science and Engineering, I-Shou University, Kaohsiung 84001, Taiwan.
Cheng-Chih LinDivision of Pulmonary Medicine, Department of Internal Medicine, Armed-Forces Zuoying General Hospital, Kaohsiung 81342, Taiwan.
Piyush Sindhu SharmaInstitute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland.
James L ThomasDepartment of Physics and Astronomy, University of New Mexico, Albuquerque, NM 87131, USA.
Chu-Yun LinFaculty of Mathematics and Natural Sciences, School of Sciences, Institute of Chemical Sciences, Cardinal Stefan Wyszynski University in Warsaw, 01-815 Warsaw, Poland.
Zofia IskierkoInstitute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland.ORCID 0000-0003-3141-6626
Paweł BorowiczInstitute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland.
Chien-Yu LinFaculty of Mathematics and Natural Sciences, School of Sciences, Institute of Chemical Sciences, Cardinal Stefan Wyszynski University in Warsaw, 01-815 Warsaw, Poland.
Wlodzimierz KutnerInstitute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland.
Chien-Hsin YangDepartment of Chemical and Materials Engineering, National University of Kaohsiung, Kaohsiung 81148, Taiwan.
Hung-Yin LinDepartment of Chemical and Materials Engineering, National University of Kaohsiung, Kaohsiung 81148, Taiwan.
Institute of Physical Chemistry · PLZuoying Armed Forces General Hospital · TWNational University of Kaohsiung · TWI-Shou University · TWUniversity of New Mexico · US

Funding

Ministry of Science and Technology of ROC MOST 106-2221-E-390-013-MY3, MOST 107-2923-M-390-001-MY3, MOST 108-2923-B-390-001-MY3, MOST 109-2314-B-390-001-MY3 and MOST 110-2221-E-390 -003 -MY3.National Center for Research and Development (NCBR) of Poland SensIPF PL-TW/VI/2/2019
6 · The paper itself

Abstract

Instead of molecularly imprinting a whole protein molecule, imprinting protein epitopes is gaining popularity due to cost and solubility issues. Belonging to the matrix metalloproteinase protein family, MMP-1 is an interstitial collagenase that degrades collagen and may be involved in cell migration, cell proliferation, the pro-inflammatory effect, and cancer progression. Hence, it can serve as a disease protein biomarker and thus be useful in early diagnosis. Herein, epitopes of MMP-1 were identified by screening its crystal structure. To identify possible epitopes for imprinting, MMP-1 was cleaved in silico with trypsin, pepsin at pH = 1.3, and pepsin at pH > 2.0 using Peptide Cutter, generating peptide fragments containing 8 to 12 amino acids. Five criteria were applied to select the peptides most suitable as potential epitopes for MMP-1. The triphenylamine rhodanine-3-acetic acid (TPARA) functional monomer was synthesized to form a stable pre-polymerization complex with a selected template epitope. The complexed functional monomer was then copolymerized with 3,4-ethoxylenedioxythiophene (EDOT) using potentiodynamic electropolymerization onto indium−tin−oxide (ITO) electrodes. The composition of the molecularly imprinted poly(TPARA-co-EDOT) (MIP) was optimized by maximizing the film’s electrical conductivity. Cyclic voltammetry was used to determine MMP-1 concentration in the presence of the Fe(CN)63−/Fe(CN)64− redox probe actuating the “gate effect.” A calibration curve was constructed and used to determine the usable concentration range and the limit of detection as ca. 0.001 to 10.0 pg/mL and 0.2 fg/mL MMP-1, respectively. Finally, the MMP-1 concentration in the A549 human lung (carcinoma) culture medium was measured, and this determination accuracy was confirmed using an ELISA assay.

Indexed as

Molecular ImprintingEpitopesHumansMatrix Metalloproteinase 1Pepsin APeptidesPoly APolymersEpitopesMatrix Metalloproteinase 1Pepsin APeptidesPoly APolymersconductive polymerelectrochemical sensingepitope imprintingmatrix metalloproteinase-1

Identifiers

PMID36421137
PMCPMC9688374
OpenAlexW4309313637

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.