ReviewFrontiers in genetics2022
Genomic survey of TCP transcription factors in plants: Phylogenomics, evolution and their biology.
Review in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 28 citations in OpenAlex.
- Functional Characterization of the Oat (International journal of molecular sciences · 2026Article
- Emerging concepts of reactive oxygen species functions in plants.Biochemical Society transactions · 2026Review
- Genome-Wide Identification of thePlants (Basel, Switzerland) · 2026Article
- Genome-Wide Analysis IdentifiesCurrent issues in molecular biology · 2026Article
- Recent Advances in Transcription Factor-Mediated Regulation of Salvianolic Acid Biosynthesis inPlants (Basel, Switzerland) · 2026Review
- HC-Pro Disrupts miR319-TCP Regulatory Pathways to Induce Sterility in Transgenic Plants.International journal of molecular sciences · 2025Article
- Article
- Article
- Non-radiate flowers are associated with truncation of the CYCLOIDEA gene in Scaevola aemula (Goodeniaceae).Scientific reports · 2025Article
- Genome-wide identification and expression analysis of the3 Biotech · 2025Article
- Systematic Analysis of thePlants (Basel, Switzerland) · 2025Article
- Genomic survey and evolution analysis of calcium-dependent protein kinases in plants and their stress-responsive patterns in populus.BMC genomics · 2024Article
- Flowering time genes branching out.Journal of experimental botany · 2024Review
- Transcriptome analysis and functional validation reveal the novel role of LhCYCL in axillary bud development in hybrid Liriodendron.Plant molecular biology · 2024Article
- Class I TCP in fruit development: much more than growth.Frontiers in plant science · 2024Review
- Genome-wide characterization of TCP family and their potential roles in abiotic stress resistance of oat (Frontiers in plant science · 2024Article
- Transcriptome-Wide Identification of TCP Transcription Factor Family Members inInternational journal of molecular sciences · 2023Article
- Antifungal Action ofAntioxidants (Basel, Switzerland) · 2023Article
- Systematic Characterization of GATA Transcription Factors inPlants (Basel, Switzerland) · 2023Article
- TCP Transcription Factors in Plant Reproductive Development: Juggling Multiple Roles.Biomolecules · 2023Review
Corrections and comments
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The TEOSINTE BRANCHED1 (TBI1), CYCLOIDEA (CYC), and PROLIFERATING CELL NUCLEAR ANTIGEN FACTORS (PCF1 and PCF2) proteins truncated as TCP transcription factors carry conserved basic-helix-loop-helix (bHLH) structure, related to DNA binding functions. Evolutionary history of the TCP genes has shown their presence in early land plants. In this paper, we performed a comparative discussion on the current knowledge of the TCP Transcription Factors in lower and higher plants: their evolutionary history based on the phylogenetics of 849 TCP proteins from 37 plant species, duplication events, and biochemical roles in some of the plants species. Phylogenetics investigations confirmed the classification of TCP TFs into Class I (the PCF1/2), and Class II (the C- clade) factors; the Class II factors were further divided into the CIN- and CYC/TB1- subclade. A trace in the evolution of the TCP Factors revealed an absence of the CYC/TB1subclade in lower plants, and an independent evolution of the CYC/TB1subclade in both eudicot and monocot species. 54% of the total duplication events analyzed were biased towards the dispersed duplication, and we concluded that dispersed duplication events contributed to the expansion of the TCP gene family. Analysis in the TCP factors functional roles confirmed their involvement in various biochemical processes which mainly included promoting cell proliferation in leaves in Class I TCPs, and cell division during plant development in Class II TCP Factors. Apart from growth and development, the TCP Factors were also shown to regulate hormonal and stress response pathways. Although this paper does not exhaust the present knowledge of the TCP Transcription Factors, it provides a base for further exploration of the gene family.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.