Evidence map›Paper›PMID 36447039›Full record

ArticleClinical and translational medicine2022

Elevated ubiquitination contributes to protective immunity against severe SARS-CoV-2 infection.

Yinggang Che, Dongbo Jiang, Yong Zhang, Junqi Zhang, Tianqi Xu, Yuanjie Sun, Jiangjiang Fan, Jiawei Wang, Ning Chang, Yingtong Wu and 7 more

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Yinggang CheDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Dongbo JiangDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Yong ZhangDepartment of Respiratory Medicine, Xijing Hospital, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Junqi ZhangDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Tianqi XuDepartment of Respiratory Medicine, Xijing Hospital, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Yuanjie SunDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Jiangjiang FanDepartment of Thoracic Surgery, Tangdu Hospital, Air-Force Medical University, Xi'an, Shaanxi, China.ORCID 0000-0002-2983-7184
Jiawei WangDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Ning ChangDepartment of Respiratory Medicine, Xijing Hospital, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Yingtong WuFirst Sanatorium of Air Force Healthcare Center for Special Services, Hangzhou, Zhejiang, China.
Shuya YangDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Leidi XuDepartment of Respiratory Medicine, Xijing Hospital, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Jiaqi DingDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Chenchen HuDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Yinan HuangDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Jian ZhangDepartment of Respiratory Medicine, Xijing Hospital, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Kun YangDepartment of Immunology, Basic Medicine School, Air-Force Medical University (The Fourth Military Medical University), Xi'an, Shaanxi, China.
Xijing Hospital · CNAir Force Medical University · CNTang Du Hospital · CNZhejiang Lab · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe crosstalk between the ubiquitin-proteasome and the immune system plays an important role in the health and pathogenesis of viral infection. However, there have been few studies of ubiquitin activation in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.

methodsWe investigated the effect of ubiquitination on SARS-CoV-2 infection and patient prognosis by integrating published coronavirus disease 2019 (COVID-19) multi-transcriptome data and bioinformatics methods.

resultsThe differential expression of COVID-19 samples revealed changed ubiquitination in most solid and hollow organs, and it was activated in lymphatic and other immune tissues. In addition, in the respiratory system of COVID-19 patients, the immune response was mainly focused on the alveoli, and the expression of ubiquitination reflected increasing immune infiltration. Ubiquitination stratification could significantly differentiate patients' prognosis and inflammation levels through the general transcriptional analysis of the peripheral blood of patients with COVID-19. Moreover, high ubiquitination levels were associated with a favourable prognosis, low inflammatory response, and reduced mechanical ventilation and intensive care unit. Moreover, high ubiquitination promoted a beneficial immune response while inhibiting immune damage. Finally, prognostic stratification and biomarker screening based on ubiquitination traits played an important role in clinical management and drug development.

conclusionUbiquitination characteristics provides new ideas for clinical intervention and prognostic guidance for COVID-19 patients.

Indexed as

COVID-19SARS-CoV-2HumansProteasome Endopeptidase ComplexUbiquitinUbiquitinationProteasome Endopeptidase ComplexUbiquitinbiomarkerimmune systemprognosissevere acute respiratory syndrome coronavirus 2ubiquitination

Identifiers

PMID36447039
PMCPMC9708907
OpenAlexW4310481528

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.