Evidence map›Paper›PMID 36452099›Full record

ArticleFrontiers in plant science2022

Building a foundation for gene family analysis in Rosaceae genomes with a novel workflow: A case study in

Huiting Zhang, Eric K Wafula, Jon Eilers, Alex E Harkess, Paula E Ralph, Prakash Raj Timilsena, Claude W dePamphilis, Jessica M Waite, Loren A Honaas

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 24 citations in OpenAlex.

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  7. Working smarter, not harder: silencingHorticulture research · 2025
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  13. The genome sequence of the pear,Wellcome open research · 2024
    Article
  14. Telomere-to-telomere pear (Horticulture research · 2023
    Article
  15. Article
  16. Article
  17. PearMODB: a multiomics database for pear (Pyrus) genomics, genetics and breeding study.Database : the journal of biological databases and curation · 2023
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Huiting ZhangTree Fruit Research Laboratory, Agricultural Research Service (ARS), United States Department of Agriculture (USDA), Wenatchee, WA, United States.
Eric K WafulaDepartment of Biology, The Pennsylvania State University, University Park, PA, United States.
Jon EilersTree Fruit Research Laboratory, Agricultural Research Service (ARS), United States Department of Agriculture (USDA), Wenatchee, WA, United States.
Alex E HarkessCollege of Agriculture, Auburn University, Auburn, AL, United States.
Paula E RalphDepartment of Biology, The Pennsylvania State University, University Park, PA, United States.
Prakash Raj TimilsenaDepartment of Biology, The Pennsylvania State University, University Park, PA, United States.
Claude W dePamphilisDepartment of Biology, The Pennsylvania State University, University Park, PA, United States.
Jessica M WaiteTree Fruit Research Laboratory, Agricultural Research Service (ARS), United States Department of Agriculture (USDA), Wenatchee, WA, United States.
Loren A HonaasTree Fruit Research Laboratory, Agricultural Research Service (ARS), United States Department of Agriculture (USDA), Wenatchee, WA, United States.
Pennsylvania State University · USUnited States Department of Agriculture · USHudsonAlpha Institute for Biotechnology · USTree Fruit Research Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rapid development of sequencing technologies has led to a deeper understanding of plant genomes. However, direct experimental evidence connecting genes to important agronomic traits is still lacking in most non-model plants. For instance, the genetic mechanisms underlying plant architecture are poorly understood in pome fruit trees, creating a major hurdle in developing new cultivars with desirable architecture, such as dwarfing rootstocks in European pear (

Indexed as

comparative genomicsEuropean pear genomegene familyPlantTribes2Rosaceaetargeted genome re-annotationtree architecture gene

Identifiers

PMID36452099
PMCPMC9702816
OpenAlexW4309039774

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.