Evidence map›Paper›PMID 36482253›Full record

ArticleNature structural & molecular biology2022

A critical period of translational control during brain development at codon resolution.

Dermot Harnett, Mateusz C Ambrozkiewicz, Ulrike Zinnall, Alexandra Rusanova, Ekaterina Borisova, Amelie N Drescher, Marta Couce-Iglesias, Gabriel Villamil, Rike Dannenberg, Koshi Imami and 9 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Ribosome Homeostasis Regulated by SETD2 Preserves Intestinal Epithelial Barrier.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  8. Article
  9. Article
  10. A gene expression atlas of a juvenile nervous system.bioRxiv : the preprint server for biology · 2025
    Article
  11. Review
  12. Article
  13. Article
  14. Ribogenesis shaping the brain.Nature cell biology · 2025
    Article
  15. A primer on copper biology in the brain.Neurobiology of disease · 2025
    Review
  16. Interpreting ribosome dynamics during mRNA translation.The Journal of biological chemistry · 2025
    Review
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 3 countries.

Dermot Harnett *Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany. dermot.p.harnett@gmail.com.ORCID http://orcid.org/0000-0002-9190-128X
Mateusz C Ambrozkiewicz *Institute of Cell Biology and Neurobiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Berlin, Germany. mateusz-cyryl.ambrozkiewicz@charite.de.ORCID http://orcid.org/0000-0001-5225-5230
Ulrike ZinnallBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.ORCID http://orcid.org/0000-0002-0782-7751
Alexandra RusanovaInstitute of Neuroscience, Lobachevsky University of Nizhny Novgorod, Nizhny Novgorod, Russian Federation.
Ekaterina BorisovaInstitute of Neuroscience, Lobachevsky University of Nizhny Novgorod, Nizhny Novgorod, Russian Federation.
Amelie N DrescherMax Planck Institute for Molecular Genetics, Berlin, Germany.
Marta Couce-IglesiasMax Planck Institute for Molecular Genetics, Berlin, Germany.
Gabriel VillamilBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.ORCID http://orcid.org/0000-0001-6701-9505
Rike DannenbergInstitute of Cell Biology and Neurobiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Berlin, Germany.
Koshi ImamiRIKEN Center for Integrative Medical Sciences, Yokohama, Japan.ORCID http://orcid.org/0000-0002-7451-4982
Agnieszka Münster-WandowskiInstitute of Neuroanatomy, Charité-Universitätsmedizin Berlin, Berlin, Germany.
Beatrix FaulerMax Planck Institute for Molecular Genetics, Berlin, Germany.
Thorsten MielkeMax Planck Institute for Molecular Genetics, Berlin, Germany.ORCID http://orcid.org/0000-0001-9275-3146
Matthias SelbachMax Delbrück Center for Molecular Medicine, Berlin, Germany.ORCID http://orcid.org/0000-0003-2454-8751
Markus LandthalerBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.ORCID http://orcid.org/0000-0002-1075-8734
Christian M T SpahnInstitute of Medical Physics and Biophysics, Charité-Universitätsmedizin Berlin, Berlin, Germany.
Victor TarabykinInstitute of Cell Biology and Neurobiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Berlin, Germany.
Uwe OhlerBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.ORCID http://orcid.org/0000-0002-0881-3116
Matthew L KrausharMax Planck Institute for Molecular Genetics, Berlin, Germany. matthew.kraushar@molgen.mpg.de.ORCID http://orcid.org/0000-0002-7359-0318
Max Delbrück Center · DEMax Planck Institute for Molecular Genetics · DEHumboldt-Universität zu Berlin · DECharité - Universitätsmedizin Berlin · DEN. I. Lobachevsky State University of Nizhny Novgorod · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Translation modulates the timing and amplification of gene expression after transcription. Brain development requires uniquely complex gene expression patterns, but large-scale measurements of translation directly in the prenatal brain are lacking. We measure the reactants, synthesis and products of mRNA translation spanning mouse neocortex neurogenesis, and discover a transient window of dynamic regulation at mid-gestation. Timed translation upregulation of chromatin-binding proteins like Satb2, which is essential for neuronal subtype differentiation, restricts protein expression in neuronal lineages despite broad transcriptional priming in progenitors. In contrast, translation downregulation of ribosomal proteins sharply decreases ribosome biogenesis, coinciding with a major shift in protein synthesis dynamics at mid-gestation. Changing activity of eIF4EBP1, a direct inhibitor of ribosome biogenesis, is concurrent with ribosome downregulation and affects neurogenesis of the Satb2 lineage. Thus, the molecular logic of brain development includes the refinement of transcriptional programs by translation. Modeling of the developmental neocortex translatome is provided as an open-source searchable resource at https://shiny.mdc-berlin.de/cortexomics .

Indexed as

Protein BiosynthesisRibosomesAnimalsBrainCodonMiceRibosomal ProteinsCodonRibosomal Proteins

Identifiers

PMID36482253
PMCPMC9758057
OpenAlexW3209377899

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.