Evidence map›Paper›PMID 36498728›Full record

ArticleJournal of clinical medicine2022

The Plasma DIA-Based Quantitative Proteomics Reveals the Pathogenic Pathways and New Biomarkers in Cervical Cancer and High Grade Squamous Intraepithelial Lesion.

Sai Han, Junhua Zhang, Yu Sun, Lu Liu, Lingyu Guo, Chunru Zhao, Jiaxin Zhang, Qiuhong Qian, Baoxia Cui, Youzhong Zhang

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Sai HanDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Junhua ZhangDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Yu SunDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Lu LiuDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Lingyu GuoDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Chunru ZhaoDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Jiaxin ZhangDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Qiuhong QianDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Baoxia CuiDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.ORCID 0000-0001-9088-1240
Youzhong ZhangDepartment of Obstetrics and Gynecology, Qilu Hospital of Shandong University, Jinan 250012, China.
Qilu Hospital of Shandong University · CN

Funding

Clinical research fund of Shandong Medical Association - Qilu Special Project YXH2022ZX02154National Natural Science Foundation of China 82172940Natural and Science Foundation Youth Project of Shandong Province ZR2021QH044Shandong Provincial Key R&D Program 2017CXGC1210the Jinan City "20 New Universities" independent innovation group 2021GXRC027
6 · The paper itself

Abstract

objectiveThe process of normal cervix changing into high grade squamous intraepithelial lesion (HSIL) and invasive cervical cancer is long and the mechanisms are still not completely clear. This study aimed to reveal the protein profiles related to HSIL and cervical cancer and find the diagnostic and prognostic molecular changes.

methodsData-independent acquisition (DIA) analysis was performed to identify 20 healthy female volunteers, 20 HSIL and 20 cervical patients in a cohort to screen differentially expressed proteins (DEPs) for the HSIL and cervical cancer. Subsequently, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were used for functional annotation of DEPs; the protein-protein interaction (PPI) and weighted gene co-expression network analysis (WGCNA) were performed for detection of key molecular modules and hub proteins. They were validated using the Enzyme-Linked Immunosorbent Assay (ELISA).

resultsA total of 243 DEPs were identified in the study groups. GO and KEGG analysis showed that DEPs were mainly enriched in the complement and coagulation pathway, cholesterol metabolism pathway, the IL-17 signaling pathway as well as the viral protein interaction with cytokine and cytokine receptor pathway. Subsequently, the WGCNA analysis showed that the green module was highly correlated with the cervical cancer stage. Additionally, six interesting core DEPs were verified by ELISA, APOF and ORM1, showing nearly the same expression pattern with DIA. The area under the curve (AUC) of 0.978 was obtained by using ORM1 combined with APOF to predict CK and HSIL+CC, and in the diagnosis of HSIL and CC, the AUC can reach to 0.982. The high expression of ORM1 is related to lymph node metastasis and the clinical stage of cervical cancer patients as well as the poor prognosis.

conclusionDIA-ELSIA combined analysis screened and validated two previously unexplored but potentially useful biomarkers for early diagnosis of HSIL and cervical cancer, as well as possible new pathogenic pathways and therapeutic targets.

Indexed as

biomarkerscervical cancerDIAELISAHSILpathogenic pathways

Identifiers

PMID36498728
PMCPMC9736146
OpenAlexW4311192357

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.