Evidence map›Paper›PMID 36506300›Full record

ArticleFrontiers in genetics2022

Epigenomic signatures associated with spontaneous and replication stress-induced DNA double strand breaks.

Sravan Kodali, Silvia Meyer-Nava, Stephen Landry, Arijita Chakraborty, Juan Carlos Rivera-Mulia, Wenyi Feng

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sravan KodaliDepartment of Biochemistry and Molecular Biology, Upstate Medical University, Syracuse, NY, United States.
Silvia Meyer-NavaDepartment of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, United States.
Stephen LandryDepartment of Biochemistry and Molecular Biology, Upstate Medical University, Syracuse, NY, United States.
Arijita ChakrabortyDepartment of Biochemistry and Molecular Biology, Upstate Medical University, Syracuse, NY, United States.
Juan Carlos Rivera-MuliaDepartment of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, United States.
Wenyi FengDepartment of Biochemistry and Molecular Biology, Upstate Medical University, Syracuse, NY, United States.
SUNY Upstate Medical University · USUniversity of Minnesota · US

Funding

Regulatory elements of replication timing and 3D genome organizationR35GM137950 · NIGMS · UNIVERSITY OF MINNESOTA · PI RIVERA-MULIA, JUAN CARLOS · 2020 to 2024
$2.3M
Mechanisms of replication stress-induced chromosome fragilityR01GM118799 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI FENG, WENYI · 2016 to 2020
$1.6M
NIGMS NIH HHS R01 GM118799NIGMS NIH HHS R35 GM137950
6 · The paper itself

Abstract

Common fragile sites (CFSs) are specific regions of all individuals' genome that are predisposed to DNA double strand breaks (DSBs) and undergo subsequent rearrangements. CFS formation can be induced

Indexed as

common fragile site (CFS)CTCFDNA double strand break (DSB)DNA replication stresshistone H3K27 trimethylationhistone H3K36 trimethylationtopologically associated domain (TAD)

Identifiers

PMID36506300
PMCPMC9730818
OpenAlexW4309858801

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.