Evidence map›Paper›PMID 36508697›Full record

ArticleJournal of clinical oncology : official journal of the American Society of Clinical Oncology2023

Genome-Wide Association Study Identifies

Xuexia Wang, Purnima Singh, Liting Zhou, Noha Sharafeldin, Wendy Landier, Lindsey Hageman, Paul Burridge, Yutaka Yasui, Yadav Sapkota, Javier G Blanco and 11 more

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 3 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 3 syntheses or guidelines pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Anthracycline Toxicity: Light at the End of the Tunnel?Annual review of pharmacology and toxicology · 2024
    Review
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 11 institutions in 1 country.

Xuexia WangFlorida International University, Miami, FL.
Purnima SinghUniversity of Alabama at Birmingham, Birmingham, AL.
Liting ZhouUniversity of Alabama at Birmingham, Birmingham, AL.
Noha SharafeldinUniversity of Alabama at Birmingham, Birmingham, AL.ORCID 0000-0001-8835-8899
Wendy LandierUniversity of Alabama at Birmingham, Birmingham, AL.ORCID 0000-0003-3319-5652
Lindsey HagemanUniversity of Alabama at Birmingham, Birmingham, AL.
Paul BurridgeNorthwestern University, Chicago, IL.ORCID 0000-0001-9616-0006
Yutaka YasuiSt Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-7717-8638
Yadav SapkotaSt Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0001-5943-9454
Javier G BlancoThe State University of New York at Buffalo, Buffalo, NY.
Kevin C OeffingerDuke University, Durham, NC.ORCID 0000-0003-0806-7894
Melissa M HudsonSt Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0001-6984-2407
Eric J ChowSeattle Children's Hospital, University of Washington, Fred Hutchinson Cancer Center, Seattle, WA.ORCID 0000-0001-7712-961X
Saro H ArmenianCity of Hope, Duarte, CA.ORCID 0000-0003-2604-8603
Joseph P NegliaUniversity of Minnesota, Minneapolis, MN.ORCID 0000-0002-5525-0598
A Kim RitcheyChildren's Hospital of Pittsburgh of UPMC, Pittsburgh, PA.
Douglas S HawkinsSeattle Children's Hospital, University of Washington, Fred Hutchinson Cancer Center, Seattle, WA.ORCID 0000-0003-3602-1375
Jill P GinsbergChildren's Hospital of Philadelphia, Philadelphia, PA.
Leslie L RobisonSt Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0001-7460-8578
Gregory T ArmstrongSt Jude Children's Research Hospital, Memphis, TN.
Smita BhatiaUniversity of Alabama at Birmingham, Birmingham, AL.ORCID 0000-0002-7755-5683
University of Alabama at Birmingham · USSt. Jude Children's Research Hospital · USSeattle Children's Hospital · USChildren's Hospital of Philadelphia · USChildren's Hospital of Pittsburgh · USCity of Hope · USDuke University · USFlorida International University · USNorthwestern University · USUniversity at Buffalo, State University of New York · USUniversity of Minnesota · US

Funding

NCTN BIQSFP ANBL1531 (NRT)U10CA180886 · NCI · PUBLIC HEALTH INSTITUTE · PI Douglas S. Hawkins · 2014 to 2026
$390.6M
COG FOREIGN ACCRUALU10CA098543 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI ADAMSON, PETER C. · 2003 to 2013
$335.5M
Women's Cancer Research ProgramP30CA014236 · NCI · DUKE UNIVERSITY · PI Laura Fish · 1985 to 2026
$174.8M
Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Shondra Michelle Miller · 1985 to 2026
$166.9M
COG SDMC - Statistics CoreU10CA180899 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TODD A ALONZO · 2014 to 2026
$132.8M
Mach-LETSGO: Machine-LEarning of Treatment, Survey, and Genetics towards Obtaining Correct Classification of Chronic Conditions in Adult Survivors in the Childhood Cancer Survivor Study - CCSS SupplU24CA055727 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Gregory Armstrong · 1999 to 2026
$96.7M
Children's Oncology Group Statistics &Data Center GrantU10CA098413 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI DEVIDAS, MEENAKSHI · 2003 to 2013
$67.5M
Towards a preventive cancer vaccine for children with constitutional mismatch repair deficiencyUG1CA189955 · NCI · PUBLIC HEALTH INSTITUTE · PI BRAD H POLLOCK, Michael E. Roth · 2014 to 2026
$62.5M
Community Clinical Oncology Program Research BaseU10CA095861 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI POLLOCK, BRAD H · 2002 to 2013
$19.5M
Mitigating Long-term Treatment-related Morbidity in Childhood Cancer SurvivorsR35CA220502 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BHATIA, SMITA · 2018 to 2024
$5.9M
NCI NIH HHS P30 CA014236NCI NIH HHS P30 CA021765NCI NIH HHS R35 CA220502NCI NIH HHS U10 CA095861NCI NIH HHS U10 CA098413NCI NIH HHS U10 CA098543NCI NIH HHS U10 CA180886NCI NIH HHS U10 CA180899NCI NIH HHS U24 CA055727NCI NIH HHS UG1 CA189955
6 · The paper itself

Abstract

purposeInterindividual variability in the dose-dependent association between anthracyclines and cardiomyopathy suggests a modifying role of genetic susceptibility. Few previous studies have examined gene-anthracycline interactions. We addressed this gap using the Childhood Cancer Survivor Study (discovery) and the Children's Oncology Group (COG) study COG-ALTE03N1 (replication).

methodsA genome-wide association study (Illumina HumanOmni5Exome Array) in 1,866 anthracycline-exposed Childhood Cancer Survivor Study participants (126 with heart failure) was used to identify single-nucleotide polymorphisms (SNPs) with either main or gene-environment interaction effect on anthracycline-related cardiomyopathy that surpassed a prespecified genome-wide threshold for statistical significance. We attempted replication in a matched case-control set of anthracycline-exposed childhood cancer survivors with (n = 105) and without (n = 160) cardiomyopathy from COG-ALTE03N1.

resultsTwo SNPs (rs17736312 [

conclusionThese findings suggest that high-dose anthracyclines combined with genetic variants involved in the profibrotic Slit-Robo signaling pathway promote cardiac fibrosis via the transforming growth factor-β1/Smad pathway, providing credence to the biologic plausibility of the association between SNP rs17736312 (

Indexed as

Cancer SurvivorsCardiomyopathiesHeart FailureNeoplasmsAnthracyclinesAntibiotics, AntineoplasticChildFibrosisGenome-Wide Association StudyHumansReceptors, ImmunologicRoundabout ProteinsTransforming Growth Factor beta1AnthracyclinesAntibiotics, AntineoplasticReceptors, ImmunologicROBO2 protein, humanRoundabout ProteinsTransforming Growth Factor beta1

Identifiers

PMID36508697
PMCPMC10043563
OpenAlexW4311187274

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.