Evidence map›Paper›PMID 36560589›Full record

ArticleVaccines2022

Immunoinformatics Approach for Epitope Mapping of Immunogenic Regions (N, F and H Gene) of Small Ruminant Morbillivirus and Its Comparative Analysis with Standard Vaccinal Strains for Effective Vaccine Development.

Muhammad Hasaan Aziz, Muhammad Zubair Shabbir, Muhammad Muddassir Ali, Zian Asif, Muhammad Usman Ijaz

Open access · goldAbstract read
In one paragraph

Article in Vaccines, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Muhammad Hasaan AzizInstitute of Microbiology, University of Veterinary and Animal Sciences, Lahore 54600, Pakistan.
Muhammad Zubair ShabbirInstitute of Microbiology, University of Veterinary and Animal Sciences, Lahore 54600, Pakistan.ORCID 0000-0002-3562-007X
Muhammad Muddassir AliInstitute of Biochemistry and Biotechnology, University of Veterinary and Animal Sciences, Lahore 54600, Pakistan.ORCID 0000-0001-7930-7782
Zian AsifInstitute of Microbiology, University of Veterinary and Animal Sciences, Lahore 54600, Pakistan.
Muhammad Usman IjazInstitute of Microbiology, University of Veterinary and Animal Sciences, Lahore 54600, Pakistan.
University of Veterinary and Animal Sciences · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOutbreaks of small ruminant morbillivirus (SRMV) are regularly occurring in Pakistan despite vaccine availability. This study was designed to identify substitutions within the immunogenic structural and functional regions of the nucleocapsid, fusion, and hemagglutinin genes of SRMV and their comparison with vaccinal strains of Nigerian and Indian origin.

methodsSwabs and tissue samples were collected from diseased animals. RT-PCR was used to characterize selected genes encoded by viral RNA. The study's N, F, and H protein sequences and vaccinal strains were analyzed for B and T cell epitope prediction using ABCpred, Bipred, and IEDB, respectively.

resultsSignificant substitutions were found on the C terminus of the nucleocapsid, within the fusion motif region of the fusion gene and in the immunoreactive region of the hemagglutinin gene.

conclusionOur results emphasize the need for the development of effective vaccines that match the existing variants of SRMV strains circulating in Pakistan.

Indexed as

fusionhemagglutininNigeria 75/1nucleocapsidsmall ruminant morbillivirusSungri 96

Identifiers

PMID36560589
PMCPMC9785197
OpenAlexW4311945100

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.