Evidence map›Paper›PMID 36567484›Full record

ArticlePlant physiology2023

Endoplasmic reticulum calnexins participate in the primary root growth response to phosphate deficiency.

Jonatan Montpetit, Joaquín Clúa, Yi-Fang Hsieh, Evangelia Vogiatzaki, Jens Müller, Steffen Abel, Richard Strasser, Yves Poirier

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Insights into cucumber (Saudi journal of biological sciences · 2024
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Jonatan MontpetitDepartment of Plant Molecular Biology, Biophore Building, University of Lausanne, 1015 Lausanne, Switzerland.ORCID 0000-0001-5347-2974
Joaquín ClúaDepartment of Plant Molecular Biology, Biophore Building, University of Lausanne, 1015 Lausanne, Switzerland.ORCID 0000-0002-8095-4511
Yi-Fang HsiehDepartment of Plant Molecular Biology, Biophore Building, University of Lausanne, 1015 Lausanne, Switzerland.ORCID 0000-0002-6897-0041
Evangelia VogiatzakiDepartment of Plant Molecular Biology, Biophore Building, University of Lausanne, 1015 Lausanne, Switzerland.ORCID 0000-0003-2503-316X
Jens MüllerDepartment of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, 06120 Halle, Germany.ORCID 0000-0002-4642-5907
Steffen AbelDepartment of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, 06120 Halle, Germany.ORCID 0000-0001-7769-4301
Richard StrasserDepartment of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, A-1190 Vienna, Austria.ORCID 0000-0001-8764-6530
Yves PoirierDepartment of Plant Molecular Biology, Biophore Building, University of Lausanne, 1015 Lausanne, Switzerland.ORCID 0000-0001-8660-294X
University of Lausanne · CHLeibniz Institute of Plant Biochemistry · DEBOKU University · AT

Funding

Swiss National Science Foundation 31003A-182462
6 · The paper itself

Abstract

Accumulation of incompletely folded proteins in the endoplasmic reticulum (ER) leads to ER stress, activates ER protein degradation pathways, and upregulates genes involved in protein folding. This process is known as the unfolded protein response (UPR). The role of ER protein folding in plant responses to nutrient deficiencies is unclear. We analyzed Arabidopsis (Arabidopsis thaliana) mutants affected in ER protein quality control and established that both CALNEXIN (CNX) genes function in the primary root response to phosphate (Pi) deficiency. CNX1 and CNX2 are homologous ER lectins promoting protein folding of N-glycosylated proteins via the recognition of the GlcMan9GlcNAc2 glycan. Growth of cnx1-1 and cnx2-2 single mutants was similar to that of the wild type under high and low Pi conditions, but the cnx1-1 cnx2-2 double mutant showed decreased primary root growth under low Pi conditions due to reduced meristematic cell division. This phenotype was specific to Pi deficiency; the double mutant responded normally to osmotic and salt stress. Expression of CNX2 mutated in amino acids involved in binding the GlcMan9GlcNAc2 glycan failed to complement the cnx1-1 cnx2-2 mutant. The root growth phenotype was Fe-dependent and was associated with root apoplastic Fe accumulation. Two genes involved in Fe-dependent inhibition of primary root growth under Pi deficiency, the ferroxidase LOW PHOSPHATE 1 (LPR1) and P5-type ATPase PLEIOTROPIC DRUG RESISTANCE 2 (PDR2) were epistatic to CNX1/CNX2. Overexpressing PDR2 failed to complement the cnx1-1 cnx2-2 root phenotype. The cnx1-1 cnx2-2 mutant showed no evidence of UPR activation, indicating a limited effect on ER protein folding. CNX might process a set of N-glycosylated proteins specifically involved in the response to Pi deficiency.

Indexed as

ArabidopsisArabidopsis ProteinsAdenosine TriphosphatasesCalnexinEndoplasmic ReticulumEndoplasmic Reticulum StressGlycoproteinsMolecular ChaperonesPhosphatesAdenosine TriphosphatasesArabidopsis ProteinsCalnexinGlycoproteinsMolecular ChaperonesPDR2 protein, ArabidopsisPhosphates

Identifiers

PMID36567484
PMCPMC10022610
OpenAlexW4312142418

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.