Evidence map›Paper›PMID 36594460›Full record

ArticleeLife2023

Molecular characterization of cell types in the squid

Jules Duruz, Marta Sprecher, Jenifer C Kaldun, Al-Sayed Al-Soudy, Heidi E L Lischer, Geert van Geest, Pamela Nicholson, Rémy Bruggmann, Simon G Sprecher

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
15.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Evolution of compound eye cell types shapes visual behaviors acrossbioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. MolluscaGenes: A Transcriptomic Database for the Mollusca.bioRxiv : the preprint server for biology · 2026
    Article
  5. A non-invasive method to genotype cephalopod sex by quantitative PCR.bioRxiv : the preprint server for biology · 2025
    Article
  6. Review
  7. Article
  8. Article
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  14. Article
  15. Functional organization of visual responses in the octopus optic lobe.bioRxiv : the preprint server for biology · 2023
    Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jules DuruzDepartment of Biology, Institute of Zoology, University of Fribourg, Fribourg, Switzerland.ORCID 0000-0003-1860-9546
Marta SprecherDepartment of Biology, Institute of Zoology, University of Fribourg, Fribourg, Switzerland.
Jenifer C KaldunDepartment of Biology, Institute of Zoology, University of Fribourg, Fribourg, Switzerland.
Al-Sayed Al-SoudyDepartment of Biology, Institute of Zoology, University of Fribourg, Fribourg, Switzerland.ORCID 0000-0002-7830-9660
Heidi E L LischerInterfaculty Bioinformatics Unit and Swiss Institute of Bioinformatics, University of Bern, Bern, Switzerland.ORCID 0000-0002-9616-2092
Geert van GeestInterfaculty Bioinformatics Unit and Swiss Institute of Bioinformatics, University of Bern, Bern, Switzerland.ORCID 0000-0002-1561-078X
Pamela NicholsonInstitute of Genetics, University of Bern, Bern, Switzerland.
Rémy BruggmannInterfaculty Bioinformatics Unit and Swiss Institute of Bioinformatics, University of Bern, Bern, Switzerland.ORCID 0000-0003-4733-7922
Simon G SprecherDepartment of Biology, Institute of Zoology, University of Fribourg, Fribourg, Switzerland.ORCID 0000-0001-9060-3750
University of Fribourg · CHUniversity of Bern · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cephalopods are set apart from other mollusks by their advanced behavioral abilities and the complexity of their nervous systems. Because of the great evolutionary distance that separates vertebrates from cephalopods, it is evident that higher cognitive features have evolved separately in these clades despite the similarities that they share. Alongside their complex behavioral abilities, cephalopods have evolved specialized cells and tissues, such as the chromatophores for camouflage or suckers to grasp prey. Despite significant progress in genome and transcriptome sequencing, the molecular identities of cell types in cephalopods remain largely unknown. We here combine single-cell transcriptomics with in situ gene expression analysis to uncover cell type diversity in the European squid

Indexed as

CephalopodaChromatophoresLoligoAnimalsDecapodiformesMolluscacell typecephalopoddevelopmental biologyevolutionLoligo vulgarisneurosciencesingle-cell RNAseq

Identifiers

PMID36594460
PMCPMC9839350
OpenAlexW4313454441

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.