Evidence map›Paper›PMID 36600207›Full record

ArticleBMC plant biology2023

Transcriptomic and metabolomic data reveal key genes that are involved in the phenylpropanoid pathway and regulate the floral fragrance of Rhododendron fortunei.

Guoxia Yang, Yi Qin, Yonghong Jia, Xiaohong Xie, Dongbin Li, Baoxin Jiang, Qu Wang, Siyu Feng, Yueyan Wu

Open access · goldAbstract read
PubMed Publisher
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Multi-Omics Provides New Insights into the Aroma Regulation ofCurrent issues in molecular biology · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Genomic, transcriptomic and metabolomic analyses ofFrontiers in plant science · 2024
    Article
  12. Molecular mechanisms underlying floral fragrance inFrontiers in plant science · 2024
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Guoxia YangCollege of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Yi QinCollege of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Yonghong JiaCollege of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Xiaohong XieCollege of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Dongbin LiNingbo Forest Farm, Ningbo, 315100, Zhejiang, China.
Baoxin JiangCollege of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Qu WangCollege of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Siyu FengCollege of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China.
Yueyan WuCollege of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, 315100, Zhejiang, China. wyy2000@zwu.edu.cn.
Zhejiang Wanli University · CNUniversity of Nottingham Ningbo China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTo reveal the key genes involved in the phenylpropanoid pathway, which ultimately governs the fragrance of Rhododendron fortunei, we performed a comprehensive transcriptome and metabolomic analysis of the petals of two different varieties of two alpine rhododendrons: the scented R. fortunei and the unscented Rhododendron 'Nova Zembla'.

resultsOur transcriptomic and qRT-PCR data showed that nine candidate genes were highly expressed in R. fortunei but were downregulated in Rhododendron 'Nova Zembla'. Among these genes, EGS expression was significantly positively correlated with various volatile benzene/phenylpropanoid compounds and significantly negatively correlated with the contents of various nonvolatile compounds, whereas CCoAOMT, PAL, C4H, and BALDH expression was significantly negatively correlated with the contents of various volatile benzene/phenylpropanoid compounds and significantly positively correlated with the contents of various nonvolatile compounds. CCR, CAD, 4CL, and SAMT expression was significantly negatively correlated with the contents of various benzene/phenylpropanoid compounds. The validation of RfSAMT showed that the RfSAMT gene regulates the synthesis of aromatic metabolites in R. fortunei.

conclusionThe findings of this study indicated that key candidate genes and metabolites involved in the phenylpropanoid biosynthesis pathway may govern the fragrance of R. fortunei. This lays a foundation for further research on the molecular mechanism underlying fragrance in the genus Rhododendron.

Indexed as

PropionatesRhododendronBenzeneGene Expression ProfilingGene Expression Regulation, PlantMetabolomeOdorantsTranscriptomeBenzenePropionatesBenzenes/phenylpropanoidsFloral aromaMetabolome and transcriptome analysesPhenylpropanoid biosynthesis pathwayRhododendronSalicylic acid carboxyl methyl transferase

Identifiers

PMID36600207
OpenAlexW4313545651

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.