Evidence map›Paper›PMID 36635368›Full record

ArticleCommunications biology2023

A versatile Halo- and SNAP-tagged BMP/TGFβ receptor library for quantification of cell surface ligand binding.

Jerome Jatzlau, Wiktor Burdzinski, Michael Trumpp, Leon Obendorf, Kilian Roßmann, Katharina Ravn, Marko Hyvönen, Francesca Bottanelli, Johannes Broichhagen, Petra Knaus

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  11. Uncovering Tumor-Promoting Roles of Activin A in Pancreatic Ductal Adenocarcinoma.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Chemical science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Jerome Jatzlau *Institute of Chemistry and Biochemistry - Biochemistry, Berlin, Germany.ORCID 0000-0002-1757-0267
Wiktor Burdzinski *Institute of Chemistry and Biochemistry - Biochemistry, Berlin, Germany.ORCID 0000-0002-4495-5779
Michael TrumppInstitute of Chemistry and Biochemistry - Biochemistry, Berlin, Germany.ORCID 0000-0002-6151-9151
Leon ObendorfInstitute of Chemistry and Biochemistry - Biochemistry, Berlin, Germany.
Kilian RoßmannLeibniz-Forschungsinstitut für Molekulare Pharmakologie, Berlin, Germany.
Katharina RavnDepartment of Biochemistry, University of Cambridge, Cambridge, UK.
Marko HyvönenDepartment of Biochemistry, University of Cambridge, Cambridge, UK.ORCID 0000-0001-8683-4070
Francesca BottanelliInstitute of Chemistry and Biochemistry - Biochemistry, Berlin, Germany.
Johannes BroichhagenLeibniz-Forschungsinstitut für Molekulare Pharmakologie, Berlin, Germany.ORCID 0000-0003-3084-6595
Petra KnausInstitute of Chemistry and Biochemistry - Biochemistry, Berlin, Germany. petra.knaus@fu-berlin.de.ORCID 0000-0003-2492-1667
Berlin-Brandenburger Centrum für Regenerative Therapien · DELeibniz-Forschungsinstitut für Molekulare Pharmakologie · DEUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TGFβs, BMPs and Activins regulate numerous developmental and homeostatic processes and signal through hetero-tetrameric receptor complexes composed of two types of serine/threonine kinase receptors. Each of the 33 different ligands possesses unique affinities towards specific receptor types. However, the lack of specific tools hampered simultaneous testing of ligand binding towards all BMP/TGFβ receptors. Here we present a N-terminally Halo- and SNAP-tagged TGFβ/BMP receptor library to visualize receptor complexes in dual color. In combination with fluorescently labeled ligands, we established a Ligand Surface Binding Assay (LSBA) for optical quantification of receptor-dependent ligand binding in a cellular context. We highlight that LSBA is generally applicable to test (i) binding of different ligands such as Activin A, TGFβ1 and BMP9, (ii) for mutant screens and (iii) evolutionary comparisons. This experimental set-up opens opportunities for visualizing ligand-receptor binding dynamics, essential to determine signaling specificity and is easily adaptable for other receptor signaling pathways.

Indexed as

Bone Morphogenetic ProteinsTransforming Growth Factor betaBone Morphogenetic Protein ReceptorsLigandsReceptors, Transforming Growth Factor betaBone Morphogenetic Protein ReceptorsBone Morphogenetic ProteinsLigandsReceptors, Transforming Growth Factor betaTransforming Growth Factor beta

Identifiers

PMID36635368
PMCPMC9837045
OpenAlexW4315779629

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.