Evidence map›Paper›PMID 36639365›Full record

ArticleNature communications2023

Gut microbiome dysbiosis drives metabolic dysfunction in Familial dysautonomia.

Alexandra M Cheney, Stephanann M Costello, Nicholas V Pinkham, Annie Waldum, Susan C Broadaway, Maria Cotrina-Vidal, Marc Mergy, Brian Tripet, Douglas J Kominsky, Heather M Grifka-Walk and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Primate gut microbiota induce evolutionarily salient changes in mouse neurodevelopment.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. The Use of Dansyl Chloride to Probe Protein Structure and Dynamics.International journal of molecular sciences · 2025
    Article
  5. Article
  6. The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

Alexandra M Cheney *Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT, USA.ORCID 0000-0003-3425-2612
Stephanann M Costello *Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT, USA.
Nicholas V Pinkham *Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Annie WaldumDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT, USA.
Susan C BroadawayDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Maria Cotrina-VidalDepartment of Neurology, New York University School of Medicine, New York, NY, USA.
Marc MergyDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Brian TripetDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT, USA.
Douglas J KominskyDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Heather M Grifka-WalkDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Horacio KaufmannDepartment of Neurology, New York University School of Medicine, New York, NY, USA.ORCID 0000-0002-1851-9981
Lucy Norcliffe-KaufmannDepartment of Neurology, New York University School of Medicine, New York, NY, USA.
Jesse T PeachDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT, USA.ORCID 0000-0003-4095-5242
Brian BothnerDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT, USA.
Frances LefcortDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA. lefcort@montana.edu.
Valérie CopiéDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT, USA. vcopie@montana.edu.ORCID 0000-0002-2778-1463
Seth T WalkDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA. seth.walk@montana.edu.ORCID 0000-0001-6891-8537
Montana State University · USNew York University · US

Funding

Research Core (Developmental Research Project Program)P20GM103474 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Jeffrey Good · 2012 to 2026
$60.0M
Metabolic Control of gut-brain axis in Familial dysautonomia Supplement to parent grant 1R01DK117473-01A1 to support a PhD candidate/graduate student from an under-represented minorityR01DK117473 · NIDDK · MONTANA STATE UNIVERSITY - BOZEMAN · PI COPIE, VALERIE, WALK, SETH T · 2018 to 2022
$3.0M
Acquisition of a 600 MHz NMR cryoprobe and 600 MHz spectrometer console upgradeS10RR026659 · NCRR · MONTANA STATE UNIVERSITY - BOZEMAN · PI COPIE, VALERIE · 2011 to 2011
$600k
Ultra Performance Liquid Chromatography Tandem Mass Spectrometer for MetabolomicsS10OD028650 · OD · MONTANA STATE UNIVERSITY - BOZEMAN · PI BOTHNER, BRIAN P · 2020 to 2020
$599k
NCRR NIH HHS S10 RR026659NIDDK NIH HHS R01 DK117473NIGMS NIH HHS P20 GM103474NIH HHS S10 OD028650
6 · The paper itself

Abstract

Familial dysautonomia (FD) is a rare genetic neurologic disorder caused by impaired neuronal development and progressive degeneration of both the peripheral and central nervous systems. FD is monogenic, with >99.4% of patients sharing an identical point mutation in the elongator acetyltransferase complex subunit 1 (ELP1) gene, providing a relatively simple genetic background in which to identify modifiable factors that influence pathology. Gastrointestinal symptoms and metabolic deficits are common among FD patients, which supports the hypothesis that the gut microbiome and metabolome are altered and dysfunctional compared to healthy individuals. Here we show significant differences in gut microbiome composition (16 S rRNA gene sequencing of stool samples) and NMR-based stool and serum metabolomes between a cohort of FD patients (~14% of patients worldwide) and their cohabitating, healthy relatives. We show that key observations in human subjects are recapitulated in a neuron-specific Elp1-deficient mouse model, and that cohousing mutant and littermate control mice ameliorates gut microbiome dysbiosis, improves deficits in gut transit, and reduces disease severity. Our results provide evidence that neurologic deficits in FD alter the structure and function of the gut microbiome, which shifts overall host metabolism to perpetuate further neurodegeneration.

Indexed as

Dysautonomia, FamilialGastrointestinal MicrobiomeAnimalsCentral Nervous SystemDysbiosisHumansMiceNeurons

Identifiers

PMID36639365
PMCPMC9839693
OpenAlexW4316015744

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.