Evidence map›Paper›PMID 36670103›Full record

ArticleBlood cancer journal2023

Alternative splicing in multiple myeloma is associated with the non-homologous end joining pathway.

Enze Liu, Nathan Becker, Parvathi Sudha, Chuanpeng Dong, Yunlong Liu, Jonathan Keats, Gareth Morgan, Brian A Walker

Open access · goldAbstract read
In one paragraph

Article in Blood cancer journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Enze LiuMelvin and Bren Simon Comprehensive Cancer Center, Division of Hematology and Oncology, School of Medicine, Indiana University, Indianapolis, IN, USA.
Nathan BeckerMelvin and Bren Simon Comprehensive Cancer Center, Division of Hematology and Oncology, School of Medicine, Indiana University, Indianapolis, IN, USA.
Parvathi SudhaMelvin and Bren Simon Comprehensive Cancer Center, Division of Hematology and Oncology, School of Medicine, Indiana University, Indianapolis, IN, USA.
Chuanpeng DongCenter for Computational Biology and Bioinformatics, School of Medicine, Indiana University, Indianapolis, IN, USA.
Yunlong LiuCenter for Computational Biology and Bioinformatics, School of Medicine, Indiana University, Indianapolis, IN, USA.
Jonathan KeatsTranslational Genomics Research Institute (TGen), Integrated Cancer Genomics Division, Phoenix, AZ, USA.ORCID 0000-0003-4375-7399
Gareth MorganNYU Langone Medical Center, Perlmutter Cancer Center, NYU Langone Health, New York, NY, USA.
Brian A WalkerMelvin and Bren Simon Comprehensive Cancer Center, Division of Hematology and Oncology, School of Medicine, Indiana University, Indianapolis, IN, USA. bw75@iu.edu.ORCID 0000-0002-8615-6254
Indiana University Health · USIndiana University – Purdue University Indianapolis · USNYU Langone Health · USTranslational Genomics Research Institute · USYale University · US

Funding

Unfolded Protein Response and Autophagy in T Helper Cell Effector FunctionP20GM121176 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Samuel Joseph Endicott · 2017 to 2026
$24.9M
Mutographs differentiating the racial and temporal incidence of multiple myelomaR01CA249981 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MORGAN, GARETH JOHN · 2021 to 2025
$5.6M
NCI NIH HHS R01 CA249981NIGMS NIH HHS P20 GM121176
6 · The paper itself

Abstract

Alternative splicing plays a pivotal role in tumorigenesis and proliferation. However, its pattern and pathogenic role has not been systematically analyzed in multiple myeloma or its subtypes. Alternative splicing profiles for 598 newly diagnosed myeloma patients with comprehensive genomic annotation identified primary translocations, 1q amplification, and DIS3 events to have more differentially spliced events than those without. Splicing levels were correlated with expression of splicing factors. Moreover, the non-homologous end joining pathway was an independent factor that was highly associated with splicing frequency as well as an increased number of structural variants. We therefore identify an axis of high-risk disease encompassing expression of the non-homologous end joining pathway, increase structural variants, and increased alternative splicing that are linked together. This indicates a joint pathogenic role for DNA damage response and alternative RNA processing in myeloma.

Indexed as

Alternative SplicingMultiple MyelomaHumansTranslocation, Genetic

Identifiers

PMID36670103
PMCPMC9859791
OpenAlexW4317549001

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.