Evidence map›Paper›PMID 36670355›Full record

ArticleBMC plant biology2023

Metabolic profile and transcriptome reveal the mystery of petal blotch formation in rose.

Naizhe Ji, Qianyu Wang, Shanshan Li, Jiaxin Wen, Liangsheng Wang, Xiaohao Ding, Shiwei Zhao, Hui Feng

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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  4. Frontiers in plant science · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 1 country.

Naizhe Ji *Beijing Key Lab of Greening Plants Breeding, Beijing Academy of Forestry and Landscape Architecture, Beijing, China.
Qianyu Wang *Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Shanshan LiKey Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Jiaxin WenCollege of Forestry, Henan Agricultural University, Zhengzhou, China.
Liangsheng WangKey Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Xiaohao DingCollege of Food Science, Fuyang Normal University, Fuyang, China.
Shiwei ZhaoBeijing Key Lab of Greening Plants Breeding, Beijing Academy of Forestry and Landscape Architecture, Beijing, China. iloverosebo@sina.com.
Hui FengBeijing Key Lab of Greening Plants Breeding, Beijing Academy of Forestry and Landscape Architecture, Beijing, China. fenghuiaa@aliyun.com.
Beijing Academy of Agricultural and Forestry Sciences · CNBeijing Botanical Garden · CNChina National Botanical GardenFuyang Normal University · CNHenan Agricultural University · CNUniversity of Chinese Academy of Sciences · CN

Funding

the Fuyang City-Univ. Cooperation Project SXHZ202104the Key Research and Development Program of National Forestry and Grassland Innovation Alliance GLM[2021]71the Program of Beijing Key Lab of Greening Plants Breeding YZZD202103
6 · The paper itself

Abstract

backgroundPetal blotch is a unique ornamental trait in angiosperm families, and blotch in rose petal is rare and has great esthetic value. However, the cause of the formation of petal blotch in rose is still unclear. The influence of key enzyme genes and regulatory genes in the pigment synthesis pathways needs to be explored and clarified.

resultsIn this study, the rose cultivar 'Sunset Babylon Eyes' with rose-red to dark red blotch at the base of petal was selected as the experimental material. The HPLC-DAD and UPLC-TQ-MS analyses indicated that only cyanidin 3,5-O-diglucoside (Cy3G5G) contributed to the blotch pigmentation of 'Sunset Babylon Eyes', and the amounts of Cy3G5G varied at different developmental stages. Only flavonols but no flavone were found in blotch and non-blotch parts. As a consequence, kaempferol and its derivatives as well as quercetin and its derivatives may act as background colors during flower developmental stages. Despite of the differences in composition, the total content of carotenoids in blotch and non-blotch parts were similar, and carotenoids may just make the petals show a brighter color. Transcriptomic data, quantitative real-time PCR and promoter sequence analyses indicated that RC7G0058400 (F3'H), RC6G0470600 (DFR) and RC7G0212200 (ANS) may be the key enzyme genes for the early formation and color deepening of blotch at later stages. As for two transcription factor, RC7G0019000 (MYB) and RC1G0363600 (WRKY) may bind to the promoters of critical enzyme genes, or RC1G0363600 (WRKY) may bind to the promoter of RC7G0019000 (MYB) to activate the anthocyanin accumulation in blotch parts of 'Sunset Babylon Eyes'.

conclusionsOur findings provide a theoretical basis for the understanding of the chemical and molecular mechanism for the formation of petal blotch in rose.

Indexed as

RosaTranscriptomeAnthocyaninsCarotenoidsFlowersGene Expression Regulation, PlantMetabolomePigmentationAnthocyaninsCarotenoidsAnthocyaninBlotchFlavonolRoseTranscriptome

Identifiers

PMID36670355
PMCPMC9854060
OpenAlexW4317545857

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.