Evidence map›Paper›PMID 36692815›Full record

ArticleIndian journal of pediatrics2023

Exome Sequencing in Monogenic Forms of Rickets.

Prince Jacob, Gandham SriLakshmi Bhavani, Prajna Udupa, Zheng Wang, Sankar V Hariharan, Kishan Delampady, Ashwin Dalal, Nutan Kamath, Shiro Ikegawa, Rathika D Shenoy and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Indian journal of pediatrics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Rickets is Not Always Nutritional!Indian journal of pediatrics · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Prince JacobDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India.
Gandham SriLakshmi BhavaniDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India.
Prajna UdupaDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India.
Zheng WangLaboratory for Bone and Joint Diseases, RIKEN Center for Integrative Medical Sciences, Tokyo, Japan.
Sankar V HariharanDepartment of Pediatrics, Genetics Clinic, SAT Hospital, Government Medical College, Thiruvananthapuram, Kerala, India.
Kishan DelampadyDepartment of Endocrinology, AJ Hospital & Research Center, Mangalore, Karnataka, India.
Ashwin DalalDiagnostics Division, Center for DNA Fingerprinting & Diagnostics, Hyderabad, Telangana, India.
Nutan KamathDepartment of Pediatrics, Kasturba Medical College, Mangalore, Manipal Academy of Higher Education, Manipal, Karnataka, India.
Shiro IkegawaDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India.
Rathika D ShenoyDepartment of Pediatrics, K S Hegde Medical Academy, Nitte University, Mangalore, Karnataka, India.
Koushik HandattuDepartment of Pediatrics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India.
Hitesh ShahDepartment of Pediatric Orthopedics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India.
Katta M GirishaDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India. girish.katta@manipal.edu.ORCID 0000-0002-0139-8239
Manipal Academy of Higher Education · INCentre for DNA Fingerprinting and Diagnostics · INGovernment Medical College and Hospital · INNitte University · INRIKEN Center for Integrative Medical Sciences · JP

Funding

DBT-Wellcome Trust India Alliance IA/CRC/20/1/600002
6 · The paper itself

Abstract

objectiveTo understand the phenotypic and genotypic spectrum of genetic forms of rickets in 10 families.

methodsDetailed clinical, radiographic, and biochemical evaluation of 10 families with phenotypes suggestive of a genetic cause of rickets was performed. Molecular testing using exome sequencing aided in the diagnosis of six different forms of known genetic causes.

resultsEleven disease-causing variants including five previously reported variants (CYP27B1:c.1319_1325dup, p.(Phe443Profs*24), VDR:c.1171C>T, p.(Arg391Cys), PHEX: c.1586_1586+1del, PHEX: c.1482+5G>C, PHEX: c.58C>T, p.(Arg20*)) and six novel variants (CYP27B1:c.974C>T, p.(Thr325Met), CYP27B1: c.1376G>A, p.(Arg459His), CYP2R1: c.595C>T, p.(Arg199*), CYP2R1:c.1330G>C, p.(Gly444Arg),SLC34A3:c.1336-11_1336-1del, SLC2A2: c.589G>C, p.(Val197Leu)) in the genes known to cause monogenic rickets were identified.

conclusionThe authors hereby report a case series of individuals from India with a molecular diagnosis of rickets and provide the literature review which would help in enhancing the clinical and molecular profile for rapid and differential diagnosis of rickets.

Indexed as

Familial Hypophosphatemic Rickets25-Hydroxyvitamin D3 1-alpha-HydroxylaseExome SequencingGenotypeHumansMutationPhenotype25-Hydroxyvitamin D3 1-alpha-HydroxylaseExome sequencingHypophosphatemic ricketsRicketsVitamin-D-dependent rickets

Identifiers

PMID36692815
PMCPMC10627992
OpenAlexW4317829650

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.