Evidence map›Paper›PMID 36696180›Full record

ArticleJournal of thrombosis and haemostasis : JTH2023

Peripheral blood mononuclear cell tissue factor (F3 gene) transcript levels and circulating extracellular vesicles are elevated in severe coronavirus 2019 (COVID-19) disease.

Thomas J Girard, Lilian Antunes, Nan Zhang, Junedh M Amrute, Renumathi Subramanian, Irem Eldem, Kenneth E Remy, Monty Mazer, Emma C Erlich, Carlos Cruchaga and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of thrombosis and haemostasis : JTH, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Tissue Factor and COVID-19 Associated Thrombosis.Arteriosclerosis, thrombosis, and vascular biology · 2024
    Article
  12. Article
  13. Review
  14. Article
  15. International journal of molecular sciences · 2023
    Article
  16. Extracellular Vesicles and Their Role in Lung Infections.International journal of molecular sciences · 2023
    Review
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Thomas J GirardDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA.
Lilian AntunesDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA.
Nan ZhangDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Junedh M AmruteDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri, USA.
Renumathi SubramanianDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA.
Irem EldemDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA.
Kenneth E RemyDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA.
Monty MazerDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri, USA.
Emma C ErlichDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Carlos CruchagaDepartment of Psychiatry, Washington University School of Medicine, St. Louis, Missouri, USA.
Ashley L SteedDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA.
Gwendalyn J RandolphDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Jorge Di PaolaDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA. Electronic address: dipaolaj@wustl.edu.
Washington University in St. Louis · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI AIMEE S JAMES · 2001 to 2026
$128.0M
WU INSTITUTE OF CLINICAL AND TRANSLATIONAL SCIENCESUL1TR002345 · NCATS · WASHINGTON UNIVERSITY · PI William G. Powderly · 2017 to 2026
$97.8M
DIFFERENTIATION AND FUNCTION OF MONOCYTES AND MACROPHAGESR37AI049653 · NIAID · WASHINGTON UNIVERSITY · PI RANDOLPH, GWENDALYN J · 2016 to 2025
$4.3M
A Systems Biology Approach to Predicting Bleeding in HemophiliaR01HL120728 · NHLBI · COLORADO SCHOOL OF MINES · PI DI PAOLA, JORGE A, FOGELSON, AARON L · 2014 to 2018
$2.7M
A SYSTEMS BIOLOGY APPROACH TO IDENTIFYING THE MECHANISMS OF SEX HORMONE INDUCED THROMBOEMBOLISM IN PRE-MENOPAUSAL WOMENR33HL141794 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI DI PAOLA, JORGE A, NEEVES, KEITH B · 2020 to 2022
$1.9M
A SYSTEMS BIOLOGY APPROACH TO IDENTIFYING THE MECHANISMS OF SEX HORMONE INDUCED THROMBOEMBOLISM IN PRE-MENOPAUSAL WOMENR61HL141794 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI DI PAOLA, JORGE A, NEEVES, KEITH B · 2018 to 2019
$1.4M
NCATS NIH HHS UL1 TR002345NCI NIH HHS P30 CA091842NHLBI NIH HHS R01 HL120728NHLBI NIH HHS R33 HL141794NHLBI NIH HHS R61 HL141794NIAID NIH HHS R37 AI049653
6 · The paper itself

Abstract

backgroundSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is associated with excessive coagulation, thrombosis, and mortality.

objectiveTo provide insight into mechanisms that contribute to excessive coagulation in coronavirus 2019 (COVID-19) disease. PATIENTS/

methodsBlood from COVID-19 patients was investigated for coagulation-related gene expression and functional activities.

resultsSingle-cell RNA sequencing (scRNA-seq) of peripheral blood mononuclear cells from severe COVID-19 patients revealed a 5.2-fold increase in tissue factor (TF [F3 gene]) transcript expression levels (P < .05), the trigger of extrinsic coagulation; a 7.7-fold increase in C1-inhibitor (SERPING1 gene; P < .01) transcript expression levels, an inhibitor of intrinsic coagulation; and a 4.4-fold increase in anticoagulant thrombomodulin (TM [THBD gene]) transcript expression levels (P < .001). Bulk RNA-seq analysis of sorted CD14

conclusionsBeyond local lung injury, SARS-CoV-2 infection increases systemic TF (F3) transcript levels and elevates circulating extracellular vesicles that likely contribute to disease-associated coagulation, thrombosis, and related mortality.

Indexed as

Blood Coagulation DisordersCOVID-19Extracellular VesiclesThrombosisHumansLeukocytes, MononuclearSARS-CoV-2ThromboplastinF3 protein, humanThromboplastincoagulationCOVID-19thrombosistissue factortranscriptome

Identifiers

PMID36696180
PMCPMC9773443
OpenAlexW4317940573

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.