Evidence map›Paper›PMID 36702874›Full record

ArticleNature communications2023

A phosphoinositide hub connects CLE peptide signaling and polar auxin efflux regulation.

Qian Wang, A Cecilia Aliaga Fandino, Moritz Graeff, Thomas A DeFalco, Cyril Zipfel, Christian S Hardtke

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Receptor kinase pathway signal tuning through a nontranscriptional incoherent feedforward loop.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Qian Wang *Department of Plant Molecular Biology, University of Lausanne, CH-1015, Lausanne, Switzerland.ORCID 0000-0003-1113-1252
A Cecilia Aliaga Fandino *Department of Plant Molecular Biology, University of Lausanne, CH-1015, Lausanne, Switzerland.ORCID 0000-0003-2245-6570
Moritz GraeffDepartment of Plant Molecular Biology, University of Lausanne, CH-1015, Lausanne, Switzerland.ORCID 0000-0001-6316-7770
Thomas A DeFalcoInstitute of Plant and Microbial Biology, University of Zurich, Zurich-Basel Plant Science Center, CH-8008, Zurich, Switzerland.ORCID 0000-0003-2897-1485
Cyril ZipfelInstitute of Plant and Microbial Biology, University of Zurich, Zurich-Basel Plant Science Center, CH-8008, Zurich, Switzerland.ORCID 0000-0003-4935-8583
Christian S HardtkeDepartment of Plant Molecular Biology, University of Lausanne, CH-1015, Lausanne, Switzerland. christian.hardtke@unil.ch.ORCID 0000-0003-3203-1058
University of Lausanne · CHUniversity of Zurich · CHWestern University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxin efflux through plasma-membrane-integral PIN-FORMED (PIN) carriers is essential for plant tissue organization and tightly regulated. For instance, a molecular rheostat critically controls PIN-mediated auxin transport in developing protophloem sieve elements of Arabidopsis roots. Plasma-membrane-association of the rheostat proteins, BREVIS RADIX (BRX) and PROTEIN KINASE ASSOCIATED WITH BRX (PAX), is reinforced by interaction with PHOSPHATIDYLINOSITOL-4-PHOSPHATE-5-KINASE (PIP5K). Genetic evidence suggests that BRX dampens autocrine signaling of CLAVATA3/EMBRYO SURROUNDING REGION-RELATED 45 (CLE45) peptide via its receptor BARELY ANY MERISTEM 3 (BAM3). How excess CLE45-BAM3 signaling interferes with protophloem development and whether it does so directly or indirectly remains unclear. Here we show that rheostat polarity is independent of PIN polarity, but interdependent with PIP5K. Catalytically inactive PIP5K confers rheostat polarity without reinforcing its localization, revealing a possible PIP5K scaffolding function. Moreover, PIP5K and PAX cooperatively control local PIN abundance. We further find that CLE45-BAM3 signaling branches via RLCK-VII/PBS1-LIKE (PBL) cytoplasmic kinases to destabilize rheostat localization. Our data thus reveal antagonism between CLE45-BAM3-PBL signaling and PIP5K that converges on auxin efflux regulation through dynamic control of PAX polarity. Because second-site bam3 mutation suppresses root as well as shoot phenotypes of pip5k mutants, CLE peptide signaling likely modulates phosphoinositide-dependent processes in various developmental contexts.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantIndoleacetic AcidsMembrane ProteinsPeptidesPhosphatidylinositolsPlant RootsArabidopsis ProteinsCLE45 protein, ArabidopsisIndoleacetic AcidsMembrane ProteinsPeptidesPhosphatidylinositols

Identifiers

PMID36702874
PMCPMC9879999
OpenAlexW4318067234

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.