Evidence map›Paper›PMID 36711516›Full record

ArticlebioRxiv : the preprint server for biology2024

GEARBOCS: An Adeno Associated Virus Tool for

Dhanesh Sivadasan Bindu, Justin T Savage, Nicholas Brose, Luke Bradley, Kylie Dimond, Christabel Xin Tan, Cagla Eroglu

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Dhanesh Sivadasan BinduDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0002-1545-1547
Justin T SavageAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, 20815, USA.ORCID 0000-0002-1530-4942
Nicholas BroseDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0003-1559-0237
Luke BradleyDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0009-0009-8953-5661
Kylie DimondDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.
Christabel Xin TanDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0002-6483-5838
Cagla ErogluDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0002-7204-0218
Duke University · USHoward Hughes Medical Institute · USChildren's Mercy Hospital · US

Funding

Novel Genetically Encoded Indicators for Interrogating Neuron-Astrocyte Communication Across TimescalesU19NS123719 · NINDS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI TIAN, LIN · 2021 to 2025
$10.7M
Training Program in Developmental & Stem Cell BiologyT32HD040372 · NICHD · DUKE UNIVERSITY · PI Terry H Lechler · 2001 to 2026
$8.9M
New Proteomic and Genome Engineering Approaches to Decipher Astrocyte Function at SynapsesR01DA047258 · NIDA · DUKE UNIVERSITY · PI EROGLU, CAGLA, SODERLING, SCOTT H · 2018 to 2020
$2.1M
Heat Shock Factors and Protein Misfolding DiseaseRF1AG059409 · NIA · DUKE UNIVERSITY · PI EROGLU, CAGLA · 2018 to 2018
$1.9M
Control of Astrocyte Development and Astrocyte-Synapse InteractionsR01NS102237 · NINDS · DUKE UNIVERSITY · PI EROGLU, CAGLA · 2018 to 2022
$1.9M
How does neuronal contact mediate astrocyte transcriptional maturation?F31NS134252 · NINDS · DUKE UNIVERSITY · PI SAVAGE, JUSTIN · 2023 to 2025
$125k
NIA NIH HHS RF1 AG059409NICHD NIH HHS T32 HD040372NIDA NIH HHS R01 DA047258NINDS NIH HHS F31 NS134252NINDS NIH HHS R01 NS102237NINDS NIH HHS U19 NS123719
6 · The paper itself

Abstract

CRISPR/Cas9-based genome engineering enables rapid and precise gene manipulations in the CNS. Here, we developed a non-invasive astrocyte-specific method utilizing a single AAV vector, which we named GEARBOCS (Gene Editing in AstRocytes Based On CRISPR/Cas9 System). We verified GEARBOCS' specificity to mouse cortical astrocytes and demonstrated its utility for three types of gene manipulations: knockout (KO); tagging (TagIn); and reporter knock-in (GeneTrap) strategies. Next, we deployed GEARBOCS in two test cases. First, we determined that astrocytes are a necessary source of the synaptogenic factor Sparcl1 for thalamocortical synapse maintenance in the mouse primary visual cortex. Second, we determined that cortical astrocytes express the synaptic vesicle associated Vamp2 protein and found that it is required for maintaining excitatory and inhibitory synapse numbers in the visual cortex. These results show that the GEARBOCS strategy provides a fast and efficient means to study astrocyte biology

Indexed as

AstrocytesCortexCRISPRExocytosisSynapseVesicles

Identifiers

PMID36711516
PMCPMC9884502
OpenAlexW4317490316

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.