Evidence map›Paper›PMID 36726385›Full record

ArticleInfection and drug resistance2023

Characterization of the Microbiome and Host's Metabolites of the Lower Respiratory Tract During Acute Community-Acquired Pneumonia Identifies Potential Novel Markers.

Qiang Xiao, Shukun Tan, Changzhi Liu, Bin Liu, Yingxiong Li, Yehui Guo, Peiyan Hu, Zhuoying Su, Siqin Chen, Wei Lei and 3 more

Open access · goldAbstract read
In one paragraph

Article in Infection and drug resistance, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Qiang Xiao *Pulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.ORCID 0000-0002-8643-4429
Shukun Tan *Pulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Changzhi Liu *Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Bin LiuPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Yingxiong LiPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Yehui GuoPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Peiyan HuPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Zhuoying SuPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Siqin ChenPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Wei LeiPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Xi LiPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
Minhong SuPulmonary and Critical Care Medicine, Zhujiang Hospital, Southern Medical University, Guangzhou, 510280, People's Republic of China.
Fu RongPulmonary and Critical Care Medicine, Shunde Hospital, Southern Medical University (the First People's Hospital of Shunde Foshan), Foshan, 528300, People's Republic of China.
The First People's Hospital of Shunde · CNZhujiang Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Community-acquired pneumonia (CAP) is one of the most frequently encountered infectious diseases worldwide. Few studies have explored the microbial composition of the lower respiratory tract (LRT) and host metabolites of CAP. We analyzed the microbial composition of the LRT and levels of host metabolites to explore new biomarkers for CAP. Patients and Methods: Bronchoalveolar lavage fluid (BALF) was collected from 28 CAP patients and 20 healthy individuals. Following centrifugation, BALF pellets were used for amplicon sequencing of a variable region of the bacterial 16S rDNA gene to characterize the microbial composition. Non-targeted metabolomics was used to detect host's metabolites in the supernatant. Results: Compared with healthy individuals, the bacterial alpha diversity in the LRT of CAP patients was significantly lower in CAP patients (p<0.05). On the bacterial genus level, over 20 genera were detected with lower relative abundance (p<0.05), while the relative abundance of Conclusion: The composition of the LRT microbiome differed between healthy individuals and CAP patients. We propose that some respiratory microbial components and host metabolites are potentially novel diagnostic markers of CAP.

Indexed as

biomarkercommunity-acquired pneumoniadiagnosismetabolitesmicrobiome

Identifiers

PMID36726385
PMCPMC9885967
OpenAlexW4318067070

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.