Evidence map›Paper›PMID 36737500›Full record

ArticleMetallomics : integrated biometal science2023

The use of synchrotron X-ray fluorescent imaging to study distribution and content of elements in chemically fixed single cells: a case study using mouse pancreatic beta-cells.

Kira G Slepchenko, Si Chen, Kathryn L Corbin, Robert A Colvin, Craig S Nunemaker

Open access · bronzeAbstract read
In one paragraph

Article in Metallomics : integrated biometal science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Kira G SlepchenkoD epartment of Biomedical Sciences, Heritage College of Osteopathic Medicine, Ohio University, Athens, OH, USA.ORCID 0000-0001-7805-9262
Si ChenAdvanced Photon Source, Argonne National Laboratory, Lemont, IL, USA.ORCID 0000-0001-5624-9583
Kathryn L CorbinD epartment of Biomedical Sciences, Heritage College of Osteopathic Medicine, Ohio University, Athens, OH, USA.ORCID 0000-0003-4035-7322
Robert A ColvinDepartment of Biological Sciences, Ohio University, Athens, OH, USA.ORCID 0000-0003-1376-4563
Craig S NunemakerD epartment of Biomedical Sciences, Heritage College of Osteopathic Medicine, Ohio University, Athens, OH, USA.ORCID 0000-0003-2894-3388
Ohio University Lancaster · USArgonne National Laboratory · USOhio University · US

Funding

Low-grade Inflammation, Cytokines, and Beta-Cell Dysfunction in Type 2 DiabetesR01DK089182 · NIDDK · UNIVERSITY OF VIRGINIA · PI NUNEMAKER, CRAIG S · 2011 to 2015
$1.6M
Reducing Glycolytic Activity to Restore Normal Islet Glucose Sensing in Early Type 2 DiabetesR15DK121247 · NIDDK · OHIO UNIVERSITY ATHENS · PI NUNEMAKER, CRAIG S · 2019 to 2019
$453k
NIDDK NIH HHS R01 DK089182NIDDK NIH HHS R15 DK121247NIH HHS R01 DK089182
6 · The paper itself

Abstract

Synchrotron X-ray fluorescence microscopy (SXRF) presents a valuable opportunity to study the metallome of single cells because it simultaneously provides high-resolution subcellular distribution and quantitative cellular content of multiple elements. Different sample preparation techniques have been used to preserve cells for observations with SXRF, with a goal to maintain fidelity of the cellular metallome. In this case study, mouse pancreatic beta-cells have been preserved with optimized chemical fixation. We show that cell-to-cell variability is normal in the metallome of beta-cells due to heterogeneity and should be considered when interpreting SXRF data. In addition, we determined the impact of several immunofluorescence (IF) protocols on metal distribution and quantification in chemically fixed beta-cells and found that the metallome of beta-cells was not well preserved for quantitative analysis. However, zinc and iron qualitative analysis could be performed after IF with certain limitations. To help minimize metal loss using samples that require IF, we describe a novel IF protocol that can be used with chemically fixed cells after the completion of SXRF.

Indexed as

MetalsSynchrotronsAnimalsIronMiceSpectrometry, X-Ray EmissionX-RaysIronMetalsbeta-cellscalciuminsulinironmetallomesingle cell imagingSXRFzinc

Identifiers

PMID36737500
PMCPMC9933206
OpenAlexW4319216236

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.