Evidence map›Paper›PMID 36747764›Full record

ArticlebioRxiv : the preprint server for biology2023

The nanoscale organization of reticulon 4 shapes local endoplasmic reticulum structure

Lukas A Fuentes, Zach Marin, Jonathan Tyson, David Baddeley, Joerg Bewersdorf

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Lukas A FuentesDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Zach MarinDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Jonathan TysonDepartment of Chemistry, Yale University, New Haven, CT, USA.
David BaddeleyAuckland Bioengineering Institute, University of Auckland, Auckland, New Zealand.
Joerg BewersdorfDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Yale University · USUniversity of Auckland · NZ

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
Enabling Nanoscale Dynamic Imaging of Vesicles and OrganellesR01GM118486 · NIGMS · YALE UNIVERSITY · PI BADDELEY, DAVID, BEWERSDORF, JOERG · 2016 to 2019
$3.4M
Convergent Graduate Training in Engineering, Physics and BiologyT32EB019941 · NIBIB · YALE UNIVERSITY · PI O'HERN, COREY · 2016 to 2020
$998k
A super-resolution microscope for research and educationS10OD020142 · OD · YALE UNIVERSITY · PI NATHANSON, MICHAEL H · 2015 to 2015
$600k
NIBIB NIH HHS T32 EB019941NIGMS NIH HHS R01 GM118486NIGMS NIH HHS T32 GM007223NIH HHS S10 OD020142Wellcome Trust 203285/Z/16/Z
6 · The paper itself

Abstract

The endoplasmic reticulum’s (ER) structure is directly linked to the many functions of the ER but its formation is not fully understood. We investigate how the ER-membrane curving protein reticulon 4 (Rtn4) localizes to and organizes in the membrane and how that affects local ER structure. We show a strong correlation between the local Rtn4 density and the local ER membrane curvature. Our data further reveal that the typical ER tubule possesses an elliptical cross-section with Rtn4 enriched at either end of the major axis. Rtn4 oligomers are linear-shaped, contain about five copies of the protein, and preferentially orient parallel to the tubule axis. Our observations support a mechanism in which oligomerization leads to an increase of the local Rtn4 concentration with each molecule increasing membrane curvature through a hairpin wedging mechanism. This quantitative analysis of Rtn4 and its effects on the ER membrane result in a new model of tubule shape as it relates to Rtn4. Summary: Rtn4 forms linear-shaped oligomers that contain an average of five Rtn4 proteins, localize to the sides of elliptical tubules, prefer orientations near parallel to the tubule axis, and increase local curvature of the ER membrane by increasing local Rtn4 density.

Identifiers

PMID36747764
PMCPMC9900957
OpenAlexW4318305981

What Socratic holds

Textmetadata
LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.