Evidence map›Paper›PMID 36768688›Full record

ArticleInternational journal of molecular sciences2023

Prediction Model for Sensory Perception Abnormality in Autism Spectrum Disorder.

Zhe Ma, Lisha Xu, Qi Li, Xiang Li, Yaxin Shi, Xirui Zhang, Yuan Yang, Jia Wang, Lili Fan, Lijie Wu

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zhe MaDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.
Lisha XuDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.
Qi LiDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.
Xiang LiDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.
Yaxin ShiDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.
Xirui ZhangDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.
Yuan YangDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.
Jia WangDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.
Lili FanDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.ORCID 0000-0002-2114-4463
Lijie WuDepartment of Children's and Adolescent Health, Public Health College, Harbin Medical University, Harbin 150081, China.

Funding

China Postdoctoral Science Foundation 2018M631961Doctor Green seedlings ground-breaking Project of Harbin Medical University QMPT-1902Heilongjiang Province Natural Science Foundation LH2022H012
6 · The paper itself

Abstract

Autism spectrum disorder (ASD) is a neurodevelopmental disorder characterized by heterogeneous clinical phenotypes. Patients often experience abnormal sensory perception, which may further affect the ASD core phenotype, significantly and adversely affecting their quality of life. However, biomarkers for the diagnosis of ASD sensory perception abnormality are currently elusive. We sought to identify potential biomarkers related to ASD sensory perception abnormality to construct a prediction model that could facilitate the early identification of and screening for ASD. Differentially expressed genes in ASD were obtained from the Gene Expression Omnibus database and were screened for genes related to sensory perception abnormality. After enrichment analysis, the random forest method was used to identify disease-characteristic genes. A prediction model was constructed with an artificial neural network. Finally, the results were validated using data from the dorsal root ganglion, cerebral cortex, and striatum of the BTBR T+ Itpr3tf/J (BTBR) ASD mouse model. A total of 1869 differentially expressed genes in ASD were screened, among which 16 genes related to sensory perception abnormality were identified. According to enrichment analysis, these 16 genes were mainly related to actin, cholesterol metabolism, and tight junctions. Using random forest, 15 disease-characteristic genes were screened for model construction. The area under the curve of the training set validation result was 0.999, and for the model function validation, the result was 0.711, indicating high accuracy. The validation of BTBR mice confirmed the reliability of using these disease-characteristic genes for prediction of ASD. In conclusion, we developed a highly accurate model for predicting ASD sensory perception abnormality from 15 disease-characteristic genes. This model provides a new method for the early identification and diagnosis of ASD sensory perception abnormality.

Indexed as

Autism Spectrum DisorderAnimalsDisease Models, AnimalMiceMice, Inbred StrainsPerceptionQuality of LifeReproducibility of Resultsautism spectrum disorder (ASD)bioinformatical analysisdifferentially expressed genes (DEGs)prediction modelsensory perception

Identifiers

PMID36768688
PMCPMC9916460

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.