Evidence map›Paper›PMID 36777997›Full record

ArticleCell genomics2022

Leveraging global multi-ancestry meta-analysis in the study of idiopathic pulmonary fibrosis genetics.

Juulia J Partanen, Paavo Häppölä, Wei Zhou, Arto A Lehisto, Mari Ainola, Eva Sutinen, Richard J Allen, Amy D Stockwell, Olivia C Leavy, Justin M Oldham and 19 more

Abstract read
In one paragraph

Article in Cell genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Guideline
  3. Common single nucleotide polymorphisms associated with idiopathic pulmonary fibrosis: a systematic review.European respiratory review : an official journal of the European Respiratory Society · 2024
    Pooled it
  4. Multi-omics insights into the mechanisms and prognosis of IPF.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2026
    Review
  5. Article
  6. Cross-ancestry evaluation of idiopathic pulmonary fibrosis genetic risk variants.medRxiv : the preprint server for health sciences · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Genetic Familial Interstitial Lung Disease.Clinics in chest medicine · 2025
    Review
  15. The role of theERJ open research · 2025
    Article
  16. Article
  17. Genetic Associations in Non-Europeans with Pulmonary Fibrosis: Analysis of the All of Us Cohort.American journal of respiratory and critical care medicine · 2025
    Article
  18. Article
  19. Article
  20. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Juulia J PartanenInstitute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
Paavo HäppöläInstitute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
Wei ZhouAnalytic and Translational Genetics Unit, Department of Medicine, Massachusetts General Hospital, Boston, MA, USA.
Arto A LehistoInstitute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
Mari AinolaIndividualized Drug Therapy Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Eva SutinenIndividualized Drug Therapy Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Richard J AllenDepartment of Health Sciences, University of Leicester, Leicester, UK.
Amy D StockwellHuman Genetics, Genentech, South San Francisco, CA, USA.
Olivia C LeavyDepartment of Health Sciences, University of Leicester, Leicester, UK.
Justin M OldhamDivision of Pulmonary, Critical Care and Sleep Medicine, Department of Internal Medicine, University of California, Davis, Sacramento, CA, USA.
Beatriz Guillen-GuioDepartment of Health Sciences, University of Leicester, Leicester, UK.
Nancy J CoxDepartment of Medicine, Division of Genetic Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Jibril B HirboDepartment of Medicine, Division of Genetic Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
David A SchwartzDepartment of Medicine, University of Colorado, Aurora, CO, USA.
Tasha E FingerlinCenter for Genes, Environment and Health, National Jewish Health, Denver, CO, USA.
Carlos FloresResearch Unit, Hospital Universitario Ntra. Sra. de Candelaria, Santa Cruz de Tenerife, Spain.
Imre NothDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of Virginia, Charlottesville, VA, USA.
Brian L YaspanHuman Genetics, Genentech, South San Francisco, CA, USA.
R Gisli JenkinsNational Heart and Lung Institute, Imperial College London, London, UK.
Louise V WainDepartment of Health Sciences, University of Leicester, Leicester, UK.
Samuli RipattiInstitute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
Matti PirinenInstitute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
International IPF Genetics Consortium
Global Biobank Meta-Analysis Initiative (GBMI)
Tarja LaitinenAdministration Center, Tampere University Hospital and University of Tampere, Tampere, Finland.
Riitta KaarteenahoResearch Unit of Internal Medicine, University of Oulu, Oulu, Finland.
Marjukka MyllärniemiIndividualized Drug Therapy Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Mark J DalyInstitute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
Jukka T KoskelaInstitute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Pharmacogenomics of Arrhythmia TherapyU19HL065962 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RODEN, DAN M · 2010 to 2014
$17.4M
Understanding and preventing HLA-associated drug reactionsP50GM115305 · NIGMS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PHILLIPS, ELIZABETH, RODEN, DAN M · 2015 to 2019
$13.0M
The Genetic Epemiology of Multiple SclerosisR01NS032830 · NINDS · VANDERBILT UNIVERSITY · PI HAINES, JONATHAN L · 1995 to 2010
$8.9M
Epidemiologic Architecture for Genes Linked to Environment (EAGLE)U01HG004798 · NHGRI · VANDERBILT UNIVERSITY · PI CRAWFORD, DANA C · 2008 to 2013
$8.8M
VESPA: Vanderbilt Electronic Systems for Pharmacogenomic AssessmentRC2GM092618 · NIGMS · VANDERBILT UNIVERSITY · PI DENNY, JOSHUA C., RODEN, DAN M · 2009 to 2010
$6.4M
Preclinical Pulmonary Fibrosis, an opportune rare disease cohortUH3HL151865 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI SCHWARTZ, DAVID ALBERT · 2022 to 2025
$4.3M
Vanderbilt Genome Electronic Records ProjectU01HG006378 · NHGRI · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2011 to 2014
$4.0M
Diverse ancestry biobank to map biomedical traits and elucidate health disparitieU01HG007417 · NHGRI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LOOS, RUTH JF · 2013 to 2017
$3.5M
Partners Healthcare Training Program in Precision and Genomic MedicineT32HG010464 · NHGRI · MASSACHUSETTS GENERAL HOSPITAL · PI HEIDI L REHM, JORDAN W SMOLLER · 2019 to 2026
$3.1M
BLRD VA I01 BX005295Medical Research Council MC_PC_13049Medical Research Council MC_PC_14135Medical Research Council MC_U137686851Medical Research Council MC_UU_00011/1Medical Research Council MC_UU_00017/1Medical Research Council MC_UU_12026/2NCATS NIH HHS UL1 TR000445NCATS NIH HHS UL1 TR002243NCRR NIH HHS S10 RR025141NCRR NIH HHS UL1 RR024975NHGRI NIH HHS T32 HG010464NHGRI NIH HHS U01 HG004798NHGRI NIH HHS U01 HG006378NHGRI NIH HHS U01 HG007417NHLBI NIH HHS U19 HL065962NHLBI NIH HHS UH3 HL151865NICHD NIH HHS R01 HD074711NIGMS NIH HHS P50 GM115305NIGMS NIH HHS RC2 GM092618NIH HHS S10 OD017985NINDS NIH HHS R01 NS032830Wellcome Trust
6 · The paper itself

Abstract

The research of rare and devastating orphan diseases, such as idiopathic pulmonary fibrosis (IPF) has been limited by the rarity of the disease itself. The prognosis is poor-the prevalence of IPF is only approximately four times the incidence, limiting the recruitment of patients to trials and studies of the underlying biology. Global biobanking efforts can dramatically alter the future of IPF research. We describe a large-scale meta-analysis of IPF, with 8,492 patients and 1,355,819 population controls from 13 biobanks around the globe. Finally, we combine this meta-analysis with the largest available meta-analysis of IPF, reaching 11,160 patients and 1,364,410 population controls. We identify seven novel genome-wide significant loci, only one of which would have been identified if the analysis had been limited to European ancestry individuals. We observe notable pleiotropy across IPF susceptibility and severe COVID-19 infection and note an unexplained sex-heterogeneity effect at the strongest IPF locus

Indexed as

ancestryCOVID-19cross-population analysisfine-mappingGlobal Biobank Meta-Analysis InitiativeGWASidiopathic pulmonary fibrosismeta-analysisMUC5B

Identifiers

PMID36777997
PMCPMC9903787

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.