Evidence map›Paper›PMID 36781452›Full record

ArticleAmino acids2023

Phenolic compounds as histone deacetylase inhibitors: binding propensity and interaction insights from molecular docking and dynamics simulations.

Abdullahi Ibrahim Uba, Gokhan Zengin

Abstract read
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In one paragraph

Article in Amino acids, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Abdullahi Ibrahim UbaDepartment of Molecular Biology and Genetics, Istanbul AREL University, 34537, Istanbul, Turkey. abdullahi.iu2@gmail.com.ORCID http://orcid.org/0000-0002-0853-108X
Gokhan ZenginDepartment of Biology, Science Faculty, Selcuk University, 42130, Konya, Turkey. gokhanzengin@selcuk.edu.tr.ORCID http://orcid.org/0000-0001-6548-7823
Istanbul Arel University · TRSelçuk University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histone deacetylases are well-established target enzymes involved in the pathology of different diseases including cancer and neurodegenerative disorders. The approved HDAC inhibitor drugs are associated with cellular toxicities. Different phenolic compounds have been shown to possess inhibitory activities against HDACs and are, therefore, considered safer alternatives to synthetic compounds. Here, we elucidated the binding mode and calculated the binding propensity of some of the top phenolic compounds against different isoforms representing different classes of Zn

Indexed as

Histone Deacetylase InhibitorsMolecular Dynamics SimulationHistone Deacetylase 1Histone DeacetylasesMolecular Docking SimulationProtein IsoformsHistone Deacetylase 1Histone Deacetylase InhibitorsHistone DeacetylasesProtein IsoformsHDACsMolecular dockingPhenolic compoundsZn2+ ion binding

Identifiers

PMID36781452
OpenAlexW4320483865

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.