Evidence map›Paper›PMID 36798151›Full record

ArticlebioRxiv : the preprint server for biology2023

Single cell transcriptomic analysis of renal allograft rejection reveals novel insights into intragraft TCR clonality.

Tiffany Shi, Ashley R Burg, J Timothy Caldwell, Krishna Roskin, Cyd M Castro-Rojas, P Chukwunalu Chukwuma, George I Gray, Sara G Foote, Jesus Alonso, Carla M Cuda and 9 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 2 countries.

Ashley R Burg
J Timothy Caldwell
Krishna Roskin
Cyd M Castro-Rojas
P Chukwunalu Chukwuma
George I Gray
Sara G Foote
Jesus Alonso
Carla M Cuda
David A Allman
James S Rush
Catherine H Regnier
Grazyna Wieczorek
Rita R Alloway
Adele R Shields
Brian M Baker
E Steve Woodle
Cincinnati Children's Hospital Medical Center · USUniversity of Notre Dame · USNovartis (Switzerland) · CHUniversity of Cincinnati Medical Center · USNorthwestern University · USUniversity of Pennsylvania · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bulk analysis of renal allograft biopsies (rBx) identified RNA transcripts associated with acute cellular rejection (ACR); however, these lacked cellular context critical to mechanistic understanding. We performed combined single cell RNA transcriptomic and TCRα/β sequencing on rBx from patients with ACR under differing immunosuppression (IS): tacrolimus, iscalimab, and belatacept. TCR analysis revealed a highly restricted CD8

Identifiers

PMID36798151
PMCPMC9934650
OpenAlexW4319454204

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.