Evidence map›Paper›PMID 36807413›Full record

ArticleActa pharmacologica Sinica2023

Downregulation of NUP93 aggravates hypoxia-induced death of cardiomyocytes in vitro through abnormal regulation of gene transcription.

Lei Pan, Xiao-Wei Song, Jin-Chao Song, Cheng-Yong Shi, Zhong-Kai Wang, Song-Qun Huang, Zhi-Fu Guo, Song-Hua Li, Xian-Xian Zhao, Jun-Bo Ge

Open access · greenAbstract read
In one paragraph

Article in Acta pharmacologica Sinica, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
  6. Advances in the understanding of nuclear pore complexes in human diseases.Journal of cancer research and clinical oncology · 2024
    Review
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  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Lei Pan *Department of Cardiology, Zhongshan Hospital of Fudan University, Shanghai Institute of Cardiovascular Diseases, National Clinical Research Center for Interventional Medicine, Shanghai, 200032, China.
Xiao-Wei Song *Department of Cardiology, Changhai Hospital, Second Military Medical University, Shanghai, 200433, China.
Jin-Chao Song *Department of Anesthesiology, Shidong Hospital of Shanghai, University of Shanghai for Science and Technology, Shanghai, 200433, China.
Cheng-Yong ShiDepartment of Cardiology, No. 903 Hospital of Chinese People's Liberation Army, Hangzhou, 310013, China.
Zhong-Kai WangDepartment of Cardiology, Changhai Hospital, Second Military Medical University, Shanghai, 200433, China.
Song-Qun HuangDepartment of Cardiology, Changhai Hospital, Second Military Medical University, Shanghai, 200433, China.
Zhi-Fu GuoDepartment of Cardiology, Changhai Hospital, Second Military Medical University, Shanghai, 200433, China.
Song-Hua LiDepartment of Cardiology, Changhai Hospital, Second Military Medical University, Shanghai, 200433, China. lisonghua2000@163.com.
Xian-Xian ZhaoDepartment of Cardiology, Changhai Hospital, Second Military Medical University, Shanghai, 200433, China. 13601713431@163.com.
Jun-Bo GeDepartment of Cardiology, Zhongshan Hospital of Fudan University, Shanghai Institute of Cardiovascular Diseases, National Clinical Research Center for Interventional Medicine, Shanghai, 200032, China. jbge@zs-hospital.sh.cn.
Changhai Hospital · CNSecond Military Medical University · CNChinese People's Liberation Army · CNFudan University · CNShanghai University · CNZhongshan Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear pore complex in the nuclear envelope plays an important role in controlling the transportation of RNAs, proteins and other macromolecules between the nucleus and cytoplasm. The relationship between abnormal expression of nucleoporins and cardiovascular diseases is unclear. In this study we investigated how myocardial infarction affected the expression and function of nucleoporins in cardiomyocytes. We separately knocked down 27 nucleoporins in rat primary myocardial cells. Among 27 nucleoporins, knockdown of Nup93, Nup210 and Nup214 markedly increased the expression of ANP and BNP, two molecular markers of cardiomyocyte function. We showed that Nup93 was significantly downregulated in hypoxic cardiomyocytes. Knockdown of Nup93 aggravated hypoxia-induced injury and cell death of cardiomyocytes, whereas overexpression of Nup93 led to the opposite effects. RNA-seq and bioinformatics analysis revealed that knockdown of Nup93 did not affect the overall transportation of mRNAs from the nucleus to the cytoplasm, but regulated the transcription of a large number of mRNAs in cardiomyocytes, which are mainly involved in oxidative phosphorylation and ribosome subunits. Most of the down-regulated genes by Nup93 knockdown overlapped with the genes whose promoters could be directly bound by Nup93. Among these genes, we demonstrated that Nup93 knockdown significantly down-regulated the expression of YAP1. Overexpression of YAP1 partially rescued the function of Nup93 knockdown and attenuated the effects of hypoxia on cell injury and cardiomyocyte death. We conclude that down-regulation of Nup93, at least partially, contributes to hypoxia-induced injury and cardiomyocyte death through abnormal interaction with the genome to dynamically regulate the transcription of YAP1 and other genes. These results reveal a new mechanism of Nup93 and might provide new therapeutic targets for the treatment of ischemia-induced heart failure.

Indexed as

Myocytes, CardiacNuclear Pore Complex ProteinsAnimalsApoptosisDown-RegulationHypoxiaRatsTranscription, GeneticNuclear Pore Complex ProteinsNup93 protein, rathypoxiamyocardial infarctionnuclear pore complexNUP93transcriptionYAP1

Identifiers

PMID36807413
PMCPMC10104817
OpenAlexW4321376015

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.