Evidence map›Paper›PMID 36828832›Full record

ArticleNature communications2023

Single-cell transcriptome profiling of the stepwise progression of head and neck cancer.

Ji-Hye Choi, Bok-Soon Lee, Jeon Yeob Jang, Yun Sang Lee, Hyo Jeong Kim, Jin Roh, Yoo Seob Shin, Hyun Goo Woo, Chul-Ho Kim

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 151 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
151citing papers in PubMed, 1 pooled it
80.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

151 citing papers in PubMed, 1 synthesis or guideline pooled it, 215 citations in OpenAlex.

  1. Pooled it
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91 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ji-Hye Choi *Department of Physiology, Ajou University School of Medicine, Suwon, Republic of Korea.
Bok-Soon Lee *Department of Otolaryngology, Ajou University School of Medicine, Suwon, Republic of Korea.
Jeon Yeob Jang *Department of Biomedical Science, Graduate School, Ajou University, Suwon, Republic of Korea.
Yun Sang LeeDepartment of Otolaryngology, Ajou University School of Medicine, Suwon, Republic of Korea.
Hyo Jeong KimDepartment of Otolaryngology, Ajou University School of Medicine, Suwon, Republic of Korea.
Jin RohDepartment of Pathology, Ajou University School of Medicine, Suwon, Republic of Korea.
Yoo Seob ShinDepartment of Otolaryngology, Ajou University School of Medicine, Suwon, Republic of Korea.ORCID 0000-0002-2007-1100
Hyun Goo WooDepartment of Physiology, Ajou University School of Medicine, Suwon, Republic of Korea. hg@ajou.ac.kr.ORCID 0000-0002-0916-893X
Chul-Ho KimDepartment of Otolaryngology, Ajou University School of Medicine, Suwon, Republic of Korea. ostium@ajou.ac.kr.
Ajou University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Head and neck squamous cell carcinoma (HNSCC) undergoes stepwise progression from normal tissues to precancerous leukoplakia, primary HNSCC, and metastasized tumors. To delineate the heterogeneity of tumor cells and their interactions during the progression of HNSCC, we employ single-cell RNA-seq profiling for normal to metastasized tumors. We can identify the carcinoma in situ cells in leukoplakia lesions that are not detected by pathological examination. In addition, we identify the cell type subsets of the Galectin 7B (LGALS7B)-expressing malignant cells and CXCL8-expressing fibroblasts, demonstrating that their abundance in tumor tissue is associated with unfavorable prognostic outcomes. We also demonstrate the interdependent ligand-receptor interaction of COL1A1 and CD44 between fibroblasts and malignant cells, facilitating HNSCC progression. Furthermore, we report that the regulatory T cells in leukoplakia and HNSCC tissues express LAIR2, providing a favorable environment for tumor growth. Taken together, our results update the pathobiological insights into cell-cell interactions during the stepwise progression of HNSCCs.

Indexed as

Head and Neck NeoplasmsGene Expression ProfilingHumansLeukoplakiaSquamous Cell Carcinoma of Head and Neck

Identifiers

PMID36828832
PMCPMC9958029
OpenAlexW4321785574

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.