Evidence map›Paper›PMID 36830425›Full record

ArticleAnimals : an open access journal from MDPI2023

Comparing Methods to Select Candidates for Re-Genotyping to Impute Higher-Density Genotype Data in a Japanese Black Cattle Population: A Case Study.

Shinichiro Ogawa, Atsushi Zoda, Rino Kagawa, Rui Obinata

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shinichiro OgawaDivision of Meat Animal and Poultry Research, Institute of Livestock and Grassland Science, National Agriculture and Food Research Organization (NARO), Tsukuba 305-0901, Japan.ORCID 0000-0002-0537-3311
Atsushi ZodaResearch and Development Group, Zen-Noh Embryo Transfer Center, Kamishihoro 080-1407, Japan.
Rino KagawaResearch and Development Group, Zen-Noh Embryo Transfer Center, Kamishihoro 080-1407, Japan.
Rui ObinataResearch and Development Group, Zen-Noh Embryo Transfer Center, Kamishihoro 080-1407, Japan.

Funding

Kieikai Research Foundation nothing
6 · The paper itself

Abstract

As optimization methods to identify the best animals for dense genotyping to construct a reference population for genotype imputation, the MCA and MCG methods, which use the pedigree-based additive genetic relationship matrix (

Indexed as

high-density genotypingimputationJapanese Black cattlepedigreereference populationsingle-nucleotide polymorphism

Identifiers

PMID36830425
PMCPMC9951718

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.