Evidence map›Paper›PMID 36835153›Full record

ArticleInternational journal of molecular sciences2023

Differential Expression of MED12-Associated Coding RNA Transcripts in Uterine Leiomyomas.

Tsai-Der Chuang, Jianjun Gao, Derek Quintanilla, Hayden McSwiggin, Drake Boos, Wei Yan, Omid Khorram

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Transcriptomic and functional analysis of fibroid extracellular vesicles.Clinical science (London, England : 1979) · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Differential Expression of Small Non-Coding RNAs in Uterine Leiomyomas.International journal of molecular sciences · 2025
    Article
  8. The in vivo effects of knockdown of long non-coding RNA XIST on fibroid growth and gene expression.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Tsai-Der ChuangDepartment of Obstetrics and Gynecology, Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
Jianjun GaoThe Lundquist Institute for Biomedical Innovation, Torrance, CA 90502, USA.ORCID 0000-0002-7227-1032
Derek QuintanillaThe Lundquist Institute for Biomedical Innovation, Torrance, CA 90502, USA.
Hayden McSwigginThe Lundquist Institute for Biomedical Innovation, Torrance, CA 90502, USA.ORCID 0000-0001-6371-8931
Drake BoosThe Lundquist Institute for Biomedical Innovation, Torrance, CA 90502, USA.
Wei YanThe Lundquist Institute for Biomedical Innovation, Torrance, CA 90502, USA.
Omid KhorramDepartment of Obstetrics and Gynecology, Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
University of California, Los Angeles · USUCLA Medical Center · US

Funding

Tryptophan metabolism and its role in fibroid pathogenesisR01HD109286 · NICHD · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI OMID A. KHORRAM · 2022 to 2026
$1.9M
Mechanism of Long Non-coding RNAs Action in leiomyomaR01HD100529 · NICHD · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI KHORRAM, OMID A. · 2020 to 2023
$1.7M
Function of Long Non-Coding RNA MD1 in Leiomyoma PathogenesisR03HD101852 · NICHD · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI KHORRAM, OMID A. · 2021 to 2022
$154k
National Institute of Health HD100529 and HD101852NICHD NIH HHS R01 HD100529NICHD NIH HHS R01 HD109286NICHD NIH HHS R03 HD101852
6 · The paper itself

Abstract

Recent studies have demonstrated that somatic MED12 mutations in exon 2 occur at a frequency of up to 80% and have a functional role in leiomyoma pathogenesis. The objective of this study was to elucidate the expression profile of coding RNA transcripts in leiomyomas, with and without these mutations, and their paired myometrium. Next-generation RNA sequencing (NGS) was used to systematically profile the differentially expressed RNA transcripts from paired leiomyomas (n = 19). The differential analysis indicated there are 394 genes differentially and aberrantly expressed only in the mutated tumors. These genes were predominantly involved in the regulation of extracellular constituents. Of the differentially expressed genes that overlapped in the two comparison groups, the magnitude of change in gene expression was greater for many genes in tumors bearing MED12 mutations. Although the myometrium did not express MED12 mutations, there were marked differences in the transcriptome landscape of the myometrium from mutated and non-mutated specimens, with genes regulating the response to oxygen-containing compounds being most altered. In conclusion, MED12 mutations have profound effects on the expression of genes pivotal to leiomyoma pathogenesis in the tumor and the myometrium which could alter tumor characteristics and growth potential.

Indexed as

LeiomyomaMediator ComplexUterine NeoplasmsDNA Mutational AnalysisFemaleHumansMutationRNAMED12 protein, humanMediator ComplexRNAfibroidleiomyomaMED12 mutationmyometriumnext-generation RNA sequencing

Identifiers

PMID36835153
PMCPMC9960582
OpenAlexW4320491319

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.