Evidence map›Paper›PMID 36867663›Full record

ArticlePLoS genetics2023

SRGP-1/srGAP and AFD-1/afadin stabilize HMP-1/⍺-catenin at rosettes to seal internalization sites following gastrulation in C. elegans.

Joel M Serre, Mark M Slabodnick, Bob Goldstein, Jeff Hardin

Open access · goldFull text read
In one paragraph

Article in PLoS genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Single-molecule force spectroscopy reveals intra- and intermolecular interactions ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Joel M SerreProgram in Genetics University of Wisconsin-Madison, Wisconsin, United States of America.
Mark M SlabodnickDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.ORCID 0000-0003-0324-1662
Bob GoldsteinDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Jeff HardinProgram in Genetics University of Wisconsin-Madison, Wisconsin, United States of America.ORCID 0000-0001-7399-6580
University of North Carolina at Chapel Hill · USUniversity of Wisconsin–Madison · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007133 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PERNA, NICOLE T · 1985 to 2023
$16.5M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Tension-dependent regulation of alpha-catenin during morphogenesis in C. elegansR01GM058038 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HARDIN, JEFFREY D · 1998 to 2021
$6.2M
Regulation of dynamic actin networks during epithelial morphogenesisR35GM145312 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Jeffrey D Hardin · 2022 to 2026
$3.0M
C. elegans Gastrulation: a Model for Understanding Apical Constriction MechanismsR35GM134838 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROBERT P GOLDSTEIN · 2020 to 2026
$2.9M
Trio/CARMIL Regulation of Epithelial Cell RearrangementR01GM127687 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HARDIN, JEFFREY D · 2018 to 2021
$1.2M
Investigating the mechanisms that regulate apical constriction during C. elegans gastrulation.F32GM119348 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SLABODNICK, MARK MADDOCK · 2016 to 2017
$111k
NIGMS NIH HHS F32 GM119348NIGMS NIH HHS R01 GM058038NIGMS NIH HHS R01 GM127687NIGMS NIH HHS R35 GM134838NIGMS NIH HHS R35 GM145312NIGMS NIH HHS T32 GM007133NIH HHS P40 OD010440
6 · The paper itself

Abstract

A hallmark of gastrulation is the establishment of germ layers by internalization of cells initially on the exterior. In C. elegans the end of gastrulation is marked by the closure of the ventral cleft, a structure formed as cells internalize during gastrulation, and the subsequent rearrangement of adjacent neuroblasts that remain on the surface. We found that a nonsense allele of srgp-1/srGAP leads to 10-15% cleft closure failure. Deletion of the SRGP-1/srGAP C-terminal domain led to a comparable rate of cleft closure failure, whereas deletion of the N-terminal F-BAR region resulted in milder defects. Loss of the SRGP-1/srGAP C-terminus or F-BAR domain results in defects in rosette formation and defective clustering of HMP-1/⍺-catenin in surface cells during cleft closure. A mutant form of HMP-1/⍺-catenin with an open M domain can suppress cleft closure defects in srgp-1 mutant backgrounds, suggesting that this mutation acts as a gain-of-function allele. Since SRGP-1 binding to HMP-1/⍺-catenin is not favored in this case, we sought another HMP-1 interactor that might be recruited when HMP-1/⍺-catenin is constitutively open. A good candidate is AFD-1/afadin, which genetically interacts with cadherin-based adhesion later during embryonic elongation. AFD-1/afadin is prominently expressed at the vertex of neuroblast rosettes in wildtype, and depletion of AFD-1/afadin increases cleft closure defects in srgp-1/srGAP and hmp-1R551/554A/⍺-catenin backgrounds. We propose that SRGP-1/srGAP promotes nascent junction formation in rosettes; as junctions mature and sustain higher levels of tension, the M domain of HMP-1/⍺-catenin opens, allowing maturing junctions to transition from recruitment of SRGP-1/srGAP to AFD-1/afadin. Our work identifies new roles for ⍺-catenin interactors during a process crucial to metazoan development.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans Proteinsalpha CateninAnimalsCadherinsCateninsCell AdhesionGastrulationMicrofilament ProteinsRosette Formationafadinalpha CateninCadherinsCaenorhabditis elegans ProteinsCateninsMicrofilament Proteins

Identifiers

PMID36867663
PMCPMC10016700
OpenAlexW4323031725

What Socratic holds

Textfull text, public
LicenceCC BY
reference markers read1
measurements read73
identifiers read7
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.