Evidence map›Paper›PMID 36883282›Full record

ArticleOpen biology2023

Structure of the Ndc80 complex and its interactions at the yeast kinetochore-microtubule interface.

Jacob A Zahm, Simon Jenni, Stephen C Harrison

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Structure and function of the outer kinetochore.Nature reviews. Molecular cell biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jacob A ZahmDepartment of Biological Chemistry and Molecular Pharmacology, and.ORCID 0000-0002-9600-5433
Simon JenniDepartment of Biological Chemistry and Molecular Pharmacology, and.ORCID 0000-0001-5722-5890
Stephen C HarrisonDepartment of Biological Chemistry and Molecular Pharmacology, and.ORCID 0000-0001-7215-9393
Howard Hughes Medical Institute · US

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI STEVEN E EALICK · 2018 to 2026
$34.2M
Howard Hughes Medical InstituteNIGMS NIH HHS P30 GM124165
6 · The paper itself

Abstract

The conserved Ndc80 kinetochore complex, Ndc80c, is the principal link between mitotic spindle microtubules and centromere-associated proteins. We used AlphaFold 2 (AF2) to obtain predictions of the Ndc80 'loop' structure and of the Ndc80 : Nuf2 globular head domains that interact with the Dam1 subunit of the heterodecameric DASH/Dam1 complex (Dam1c). The predictions guided design of crystallizable constructs, with structures close to the predicted ones. The Ndc80 'loop' is a stiff, α-helical 'switchback' structure; AF2 predictions and positions of preferential cleavage sites indicate that flexibility within the long Ndc80c rod occurs instead at a hinge closer to the globular head. Conserved stretches of the Dam1 C terminus bind Ndc80c such that phosphorylation of Dam1 serine residues 257, 265 and 292 by the mitotic kinase Ipl1/Aurora B can release this contact during error correction of mis-attached kinetochores. We integrate the structural results presented here into our current molecular model of the kinetochore-microtubule interface. The model illustrates how multiple interactions between Ndc80c, DASH/Dam1c and the microtubule lattice stabilize kinetochore attachments.

Indexed as

KinetochoresMicrotubulesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAurora Kinase BAurora KinasesCell Cycle ProteinsCentromereFurylfuramideMicrotubule-Associated ProteinsNuclear ProteinsAurora Kinase BAurora KinasesCell Cycle ProteinsDAM1 protein, S cerevisiaeFurylfuramideIPL1 protein, S cerevisiaeMicrotubule-Associated ProteinsNDC80 protein, S cerevisiaeNuclear ProteinsNUF2 protein, S cerevisiaeSaccharomyces cerevisiae Proteinscell divisionchromosome segregationDam1 complexkinetochoreNdc80 complexstructure prediction

Identifiers

PMID36883282
PMCPMC9993044
OpenAlexW4323533512

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.