Evidence map›Paper›PMID 36888716›Full record

ArticleScience advances2023

Indigenous people from Amazon show genetic signatures of pathogen-driven selection.

Cainã M Couto-Silva, Kelly Nunes, Gabriela Venturini, Marcos Araújo Castro E Silva, Lygia V Pereira, David Comas, Alexandre Pereira, Tábita Hünemeier

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Observational
  6. Article
  7. Review
  8. The epidemiology of Chagas disease in the Americas.Lancet regional health. Americas · 2024
    Review
  9. Article
  10. Local genetic adaptation to habitat in wild chimpanzees.bioRxiv : the preprint server for biology · 2024
    Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Cainã M Couto-SilvaDepartamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, São Paulo, SP, 05508090, Brazil.ORCID 0000-0001-8847-1381
Kelly NunesDepartamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, São Paulo, SP, 05508090, Brazil.ORCID 0000-0003-0864-2414
Gabriela VenturiniDepartment of Genetics, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0003-2913-2296
Marcos Araújo Castro E SilvaDepartamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, São Paulo, SP, 05508090, Brazil.ORCID 0000-0002-9873-3717
Lygia V PereiraDepartamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, São Paulo, SP, 05508090, Brazil.ORCID 0000-0002-0002-725X
David ComasInstitut de Biologia Evolutiva, Departament de Medicina i Ciències de la Vida, Universitat Pompeu Fabra, Barcelona 08003, Spain.ORCID 0000-0002-5075-0956
Alexandre PereiraDepartment of Genetics, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-7782-5540
Tábita HünemeierDepartamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, São Paulo, SP, 05508090, Brazil.ORCID 0000-0002-3156-2079
Universidade de São Paulo · BRUniversitat Pompeu Fabra · ESHarvard University · US

Funding

Theoretical Population Genetics SupplementR01GM075091 · NIGMS · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2006 to 2020
$4.7M
Sao Paulo-Minas Gerais Tropical Medicine Research Center for Chagas Disease Biomarker DiscoveryU19AI098461 · NIAID · FUNDACAO FACULDADE DE MEDICINA · PI SABINO, ESTER CERDEIRA · 2017 to 2021
$2.1M
Genetic Determinants of Chagas CardiomyopathyR01HL133165 · NHLBI · HARVARD MEDICAL SCHOOL · PI SEIDMAN, CHRISTINE E · 2017 to 2020
$1.7M
NHLBI NIH HHS R01 HL133165NIAID NIH HHS U19 AI098461NIGMS NIH HHS R01 GM075091
6 · The paper itself

Abstract

Ecological conditions in the Amazon rainforests are historically favorable for the transmission of numerous tropical diseases, especially vector-borne diseases. The high diversity of pathogens likely contributes to the strong selective pressures for human survival and reproduction in this region. However, the genetic basis of human adaptation to this complex ecosystem remains unclear. This study investigates the possible footprints of genetic adaptation to the Amazon rainforest environment by analyzing the genomic data of 19 native populations. The results based on genomic and functional analysis showed an intense signal of natural selection in a set of genes related to

Indexed as

Chagas DiseaseTrypanosoma cruziEcosystemHumansIndigenous Peoples

Identifiers

PMID36888716
PMCPMC9995071
OpenAlexW4323636824

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.