Evidence map›Paper›PMID 36915775›Full record

ArticleAmerican journal of translational research2023

Comprehensive analysis of protein phosphatase 1 regulatory inhibitor subunit 14B, a molecule related to tumorigenesis, poor prognosis, and immune cell infiltration in lung adenocarcinoma.

Yu-Xuan Zheng, Shuo Shi, Xiao-Hong Jiang, Kai-Cheng Liu, Zhao-Jie Qin, Yong-Yong Wang, Zi-Hao Li, Ming-Wu Chen

Open access · greenAbstract read
In one paragraph

Article in American journal of translational research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Yu-Xuan ZhengDepartment of Cardio-Thoracic Surgery, The First Affiliated Hospital of Guangxi Medical University Nanning, Guangxi, People's Republic of China.
Shuo ShiDepartment of Cardio-Thoracic Surgery, The First Affiliated Hospital of Guangxi Medical University Nanning, Guangxi, People's Republic of China.
Xiao-Hong JiangDepartment of Orthopedic, Affiliated Minzu Hospital of Guangxi Medical University Nanning, Guangxi, People's Republic of China.
Kai-Cheng LiuDepartment of Bone and Joint Surgery, The First Affiliated Hospital of Guangxi Medical University Nanning, Guangxi, People's Republic of China.
Zhao-Jie QinDepartment of Orthopedic, The People's Hospital of Hechi Hechi 547600, Guangxi, People's Republic of China.
Yong-Yong WangDepartment of Cardio-Thoracic Surgery, The First Affiliated Hospital of Guangxi Medical University Nanning, Guangxi, People's Republic of China.
Zi-Hao LiDepartment of Cardio-Thoracic Surgery, The First Affiliated Hospital of Guangxi Medical University Nanning, Guangxi, People's Republic of China.
Ming-Wu ChenDepartment of Cardio-Thoracic Surgery, The First Affiliated Hospital of Guangxi Medical University Nanning, Guangxi, People's Republic of China.
First Affiliated Hospital of GuangXi Medical University · CNGuangxi Medical University · CNRiverside Hospital of Guangxi Zhuang Autonomous Region · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo explore the relationship between Protein Phosphatase 1 Regulatory Inhibitor Subunit 14B (PPP1R14B) and the occurrence of lung adenocarcinoma (LUAD).

methodPPP1R14B expression was investigated using various databases, and its molecular functions and pathways were evaluated using Gene Set Variation Analysis (GSVA) and Gene Set Enrichment Analysis (GSEA). Then, the correlation between tumor mutations and PPP1R14B expression was analyzed. Furthermore, the regulation network and expression pathway axes of PPP1R14B were constructed. The correlation analysis between PPP1R14B and immune cell infiltration was performed using deconvolution algorithm analysis and the Tumor Immune Dysfunction and Exclusion (TIDE) algorithm. Finally, quantitative real-time polymerase chain reaction (qRT-PCR) and immunohistochemical (IHC) staining of the clinical samples were used for expression validation.

resultsPPP1R14B showed high expression in tumor tissue. PPP1R14B was associated with T and N stages and poor prognosis and was linked to the cell cycle, DNA repair, and low immune response. High PPP1R14B expression was associated with high tumor mutation rates. The upstream and downstream genes of PPP1R14B were identified, along with the construction of a protein-protein interaction network (PPI network) and the expression pathway axes of PPP1R14B. PPP1R14B expression was associated with poor immune cell infiltration and a negative correlation between PPP1R14B and mast cell and eosinophil infiltration.

conclusionThis study reveals high PPP1R14B expression in LUAD, its contribution to poor prognosis, molecular function, biological pathways, and impact on immune cell infiltration, and provides great insight into the role of PPP1R14B in LUAD tumorigenesis.

Indexed as

immune cell infiltrationLung adenocarcinomaprotein phosphatase 1 regulatory inhibitor subunit 14Btumorigenesis

Identifiers

PMID36915775
PMCPMC10006819
OpenAlexW4324129523

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.