Evidence map›Paper›PMID 36919677›Full record

ArticleEpigenomics2023

Performance comparisons of methylation and structural variants from low-input whole-genome methylation sequencing.

Zhifu Sun, Saurabh Behati, Panwen Wang, Aditya Bhagwate, Samantha McDonough, Vivian Wang, William Taylor, Julie Cunningham, John Kisiel

Open access · hybridAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Epigenomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Zhifu SunDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0001-8461-7523
Saurabh BehatiDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Panwen WangDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Aditya BhagwateDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Samantha McDonoughMedical Genome Facility, Mayo Clinic, Rochester, MN 55905, USA.
Vivian WangMedical Genome Facility, Mayo Clinic, Rochester, MN 55905, USA.
William TaylorDivision of Gastroenterology & Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Julie CunninghamMedical Genome Facility, Mayo Clinic, Rochester, MN 55905, USA.
John KisielDivision of Gastroenterology & Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Mayo Clinic · USMayo Clinic in Arizona · US

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI Lila J. Rutten · 1985 to 2026
$151.3M
Multi-site Gastrointestinal Cancer Detection by Stool DNA MethylationR37CA214679 · NCI · MAYO CLINIC ROCHESTER · PI KISIEL, JOHN · 2018 to 2024
$2.8M
Multi-cancer Early DetectionR01CA214679 · NCI · MAYO CLINIC ROCHESTER · PI John Kisiel, Niloy Jewel Samadder · 2025 to 2026
$891k
NCI NIH HHS P30 CA015083NCI NIH HHS R01 CA214679NCI NIH HHS R37 CA214679
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

DNADNA MethylationDNA Copy Number VariationsGene LibraryHigh-Throughput Nucleotide SequencingHumansReproducibility of ResultsWhole Genome SequencingDNAcopy number variationCpG methylationEM-seqQIAseqsingle nucleotide variationSWIFT-seqwhole-genome methylation sequencing

Identifiers

PMID36919677
PMCPMC10072131
OpenAlexW4324305906

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.