Evidence map›Paper›PMID 36964553›Full record

ArticleMicrobial cell factories2023

Rational design of GDP‑D‑mannose mannosyl hydrolase for microbial L‑fucose production.

Cong Fu, Xuexia Xu, Yukang Xie, Yufei Liu, Min Liu, Ai Chen, Jenny M Blamey, Jiping Shi, Suwen Zhao, Junsong Sun

Open access · goldFull text read
In one paragraph

Article in Microbial cell factories, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Soluble Dietary Fiber fromInternational journal of molecular sciences · 2026
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Cong Fu *Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, 201210, China.
Xuexia Xu *School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Yukang XieShanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, 201210, China.
Yufei LiuShanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, 201210, China.
Min LiuShanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, 201210, China.
Ai ChenShanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, 201210, China.
Jenny M BlameyFundación Biociencia, José Domingo Cañas, 2280, Ñuñoa, Santiago, Chile.
Jiping ShiShanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, 201210, China.
Suwen ZhaoSchool of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China. zhaosw@shanghaitech.edu.cn.
Junsong SunShanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, 201210, China. sunjs@sari.ac.cn.
Chinese Academy of Sciences · CNShanghaiTech University · CNUniversidad de Santiago de Chile · CL

Funding

National Natural Science Foundation of China 51961125202
6 · The paper itself

Abstract

backgroundL‑Fucose is a rare sugar that has beneficial biological activities, and its industrial production is mainly achieved with brown algae through acidic/enzymatic fucoidan hydrolysis and a cumbersome purification process. Fucoidan is synthesized through the condensation of a key substance, guanosine 5'‑diphosphate (GDP)‑L‑fucose. Therefore, a more direct approach for biomanufacturing L‑fucose could be the enzymatic degradation of GDP‑L‑fucose. However, no native enzyme is known to efficiently catalyze this reaction. Therefore, it would be a feasible solution to engineering an enzyme with similar function to hydrolyze GDP‑L‑fucose.

resultsHerein, we constructed a de novo L‑fucose synthetic route in Bacillus subtilis by introducing heterologous GDP‑L‑fucose synthesis pathway and engineering GDP‑mannose mannosyl hydrolase (WcaH). WcaH displays a high binding affinity but low catalytic activity for GDP‑L‑fucose, therefore, a substrate simulation‑based structural analysis of the catalytic center was employed for the rational design and mutagenesis of selected positions on WcaH to enhance its GDP‑L‑fucose‑splitting efficiency. Enzyme mutants were evaluated in vivo by inserting them into an artificial metabolic pathway that enabled B. subtilis to yield L‑fucose. WcaH

conclusionsIn this study, we established a novel microbial engineering platform for the fermentation production of L‑fucose. Additionally, we found an efficient GDP‑mannose mannosyl hydrolase mutant for L‑fucose biosynthesis that directly hydrolyzes GDP‑L‑fucose. The engineered strain system established in this study is expected to provide new solutions for L‑fucose or its high value‑added derivatives production.

Indexed as

HydrolasesMannoseBacillus subtilisBioreactorsFermentationFucoseMetabolic EngineeringFucoseHydrolasesMannoseBacillus subtilisGDP‑L‑fucoseGDP‑mannose mannosyl hydrolaseL‑FucoseMicrobial productionMolecular modeling

Identifiers

PMID36964553
PMCPMC10037897
OpenAlexW4360859667

What Socratic holds

Textfull text, public
LicenceCC BY
measurements read62
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.