Evidence map›Paper›PMID 36969496›Full record

ArticleJournal of immunology research2023

Network-Based Method to Investigate the Promoted Cell Apoptosis Mechanisms of Oridonin in OSCC through the RNA-Transcriptome.

Guohui Wu, Yusheng Guo, Yang Liu, Xiangsheng Cai, Tanggang Deng, Tianchu Pei, Long Huang, Kai Chen, Xuan Pan

Open access · goldFull text read
In one paragraph

Article in Journal of immunology research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Guohui WuSchool of Clinical Medicine, Guangdong Pharmaceutical University, Guangzhou 510000, China.ORCID https://orcid.org/0000-0002-5193-8504
Yusheng GuoSchool of Clinical Medicine, Guangdong Pharmaceutical University, Guangzhou 510000, China.
Yang LiuDepartment of Neurology, Second Medical Center of Chinese People's Liberation Army General Hospital, Beijing 100089, China.
Xiangsheng CaiCenter for Medical Experiments, University of Chinese Academy of Science-Shenzhen Hospital, Shenzhen 518106, China.
Tanggang DengSchool of Clinical Medicine, Guangdong Pharmaceutical University, Guangzhou 510000, China.
Tianchu PeiSchool of Clinical Medicine, Guangdong Pharmaceutical University, Guangzhou 510000, China.
Long HuangSchool of Clinical Medicine, Guangdong Pharmaceutical University, Guangzhou 510000, China.
Kai ChenDepartment of Stomatology, The First Affiliated Hospital of Guangdong Pharmaceutical University, Guangzhou 510000, China.
Xuan PanSchool of Clinical Medicine, Guangdong Pharmaceutical University, Guangzhou 510000, China.ORCID https://orcid.org/0000-0002-8201-0784
Guangdong Pharmaceutical University · CNChinese People's Liberation Army · CNFirst Affiliated Hospital of Guangdong Pharmaceutical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The morbidity of oral cancer is high in the world. Oridonin is a traditional Chinese medicine that can effectively inhibit oral squamous cell carcinoma (OSCC) growth, but its mechanism remains unclear. Our previous data showed that oridonin inhibited CAL-27 cell proliferation and promoted apoptosis. Herein, we explored the mechanism and target of oridonin in human OSCC through RNA sequencing and integration of multiple bioinformatics analysis strategies. Differences in gene expression can be analyzed with RNA sequencing. Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO), gene set enrichment analysis (GSEA), Disease Ontology (DO), and other enrichment analyses were used to evaluate differentially expressed genes (DEGs). Protein-protein interaction (PPI) networks were built via the STRING database. It was found that tumor necrosis factor (TNF) signaling pathway, cytokine-cytokine receptor interaction, and nuclear factor-kappa B (NF-kappaB) signaling pathway were associated with the therapeutic effects of oridonin in OSCC. Three key genes (BIRC3, TNFSF10, and BCL6) were found to associate with cell apoptosis in OSCC cells treated with oridonin. Quantitative PCR assays verified the expression of apoptosis-related DEGs: TNFSF10, BIRC3, AIFM2, BCL6, BCL2L2, and Bax. Western blots were employed for verifying proteins expression associated with DEGs: cleaved caspase 3, Bax, Bcl-w, anti-cIAP2, and anti-TRAIL. In conclusion, our findings reveal the molecular pathways and targets by which oridonin can treat and induce cytotoxic effects in OSCC: by affecting the signaling including TNF, NF-

Indexed as

Carcinoma, Squamous CellHead and Neck NeoplasmsMouth NeoplasmsApoptosisbcl-2-Associated X ProteinComputational BiologyCytokinesDiterpenes, KauraneHumansNF-kappa BRNASquamous Cell Carcinoma of Head and NeckTranscriptomebcl-2-Associated X ProteinCytokinesDiterpenes, KauraneNF-kappa BoridoninRNA

Identifiers

PMID36969496
PMCPMC10036191
OpenAlexW4327545841

What Socratic holds

Textfull text, public
LicenceCC BY
measurements read16
table measurements read11
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.