Evidence map›Paper›PMID 36972177›Full record

ArticleeLife2023

Targeting oncogenic KRasG13C with nucleotide-based covalent inhibitors.

Lisa Goebel, Tonia Kirschner, Sandra Koska, Amrita Rai, Petra Janning, Stefano Maffini, Helge Vatheuer, Paul Czodrowski, Roger S Goody, Matthias P Müller and 1 more

Open access · goldFull text read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Targeting KRASScientific reports · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Lisa GoebelDepartment of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany.ORCID https://orcid.org/0000-0003-3477-1228
Tonia KirschnerDepartment of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany.
Sandra KoskaDepartment of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany.
Amrita RaiDepartment of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany.ORCID https://orcid.org/0000-0002-5471-5250
Petra JanningDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany.
Stefano MaffiniDepartment of Mechanistic Cell Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany.ORCID https://orcid.org/0000-0001-6380-6560
Helge VatheuerDepartment of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany.
Paul CzodrowskiDepartment of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany.
Roger S GoodyDepartment of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany.ORCID https://orcid.org/0000-0002-0772-0444
Matthias P MüllerDepartment of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany.ORCID https://orcid.org/0000-0002-1529-8933
Daniel RauhDepartment of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany.ORCID https://orcid.org/0000-0002-1970-7642
TU Dortmund University · DEMax Planck Institute of Molecular Physiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations within Ras proteins represent major drivers in human cancer. In this study, we report the structure-based design, synthesis, as well as biochemical and cellular evaluation of nucleotide-based covalent inhibitors for KRasG13C, an important oncogenic mutant of Ras that has not been successfully addressed in the past. Mass spectrometry experiments and kinetic studies reveal promising molecular properties of these covalent inhibitors, and X-ray crystallographic analysis has yielded the first reported crystal structures of KRasG13C covalently locked with these GDP analogues. Importantly, KRasG13C covalently modified with these inhibitors can no longer undergo SOS-catalysed nucleotide exchange. As a final proof-of-concept, we show that in contrast to KRasG13C, the covalently locked protein is unable to induce oncogenic signalling in cells, further highlighting the possibility of using nucleotide-based inhibitors with covalent warheads in KRasG13C-driven cancer.

Indexed as

NeoplasmsNucleotidesHumansKineticsras ProteinsSignal TransductionNucleotidesras Proteinsbiochemistrycancerchemical biologycovalent inhibitorsE. coliG13Cnucleotide analoguesRas

Identifiers

PMID36972177
PMCPMC10042540
OpenAlexW4361005898

What Socratic holds

Textfull text, public
LicenceCC BY
reference markers read8
measurements read113
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.