Evidence map›Paper›PMID 36979867›Full record

ArticleBiomedicines2023

How CD4

Giuseppe Rubens Pascucci, Elena Morrocchi, Chiara Pighi, Arianna Rotili, Alessia Neri, Chiara Medri, Giulio Olivieri, Marco Sanna, Gianmarco Rasi, Deborah Persaud and 8 more

Open access · goldFull text read
In one paragraph

Article in Biomedicines, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 3 countries.

Giuseppe Rubens PascucciResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.
Elena MorrocchiResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.
Chiara PighiResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.
Arianna RotiliDepartment of Systems Medicine, University of Rome "Tor Vergata", 00133 Rome, Italy.
Alessia NeriResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.ORCID 0000-0002-6441-2800
Chiara MedriResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.
Giulio OlivieriResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.ORCID 0000-0002-8465-3265
Marco SannaResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.ORCID 0000-0001-5709-5782
Gianmarco RasiResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.ORCID 0000-0002-2444-5800
Deborah PersaudDepartment of Pediatric Infectious Diseases, School of Medicine, Johns Hopkins University, Baltimore, MD 21218, USA.
Ann ChahroudiDepartment of Pediatrics, School of Medicine, Emory University, Atlanta, GA 30322, USA.
Mathias LichterfeldRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Eleni NastouliDepartment of Infection, Immunity and Inflammation, UCL Great Ormond Street Institute of Child Health, London WC1N 1EH, UK.
Caterina CancriniResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.
Donato AmodioResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.ORCID 0000-0003-4550-3018
Paolo RossiResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.
Nicola CotugnoResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.ORCID 0000-0002-7748-1581
Paolo PalmaResearch Unit of Clinical Immunology and Vaccinology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.ORCID 0000-0002-3066-4719
Bambino Gesù Children's Hospital · ITUniversity of Rome Tor Vergata · ITBrigham and Women's Hospital · USEmory University · USJohns Hopkins University · USUniversity College London · GB

Funding

Pediatric Adolescent Virus Elimination (PAVE) Martin Delaney CollaboratoryUM1AI164566 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Ann M Chahroudi, Deborah Persaud · 2021 to 2026
$35.5M
Targeting HIV reservoirs in children with HIVIS DNA and MVA-CMDR vaccinesU01AI135941 · NIAID · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI PALMA, PAOLO, ROBB, MERLIN L · 2018 to 2024
$6.4M
NIAID NIH HHS U01 AI135941NIAID NIH HHS UM1 AI164566NIH HHS 1UM1 AI164566-01NIH HHS U01 555 AI135941-04
6 · The paper itself

Abstract

Most of the current assays directed at the investigation of HIV reactivation are based on cultures of infected cells such as Peripheral Blood Mononuclear Cells (PBMCs) or isolated CD4

methodsUnstimulated or stimulated CD4

resultsTranscriptional profiles revealed the activation of similar pathways upon stimulation in both media with a higher magnitude of TCR cascade activation in CD4

conclusionsThese results suggest that for studies aiming at quantifying the magnitude of biological mechanisms under T cell activation, the autologous plasma could better approximate the in vivo environment. Conversely, if the study aims at defining qualitative aspects, then RPMI culture could provide more evident results.

Indexed as

autologous plasmaCD4+ T cellsHIV reactivationin vitro culturesOxford Nanopore technologiesPMA/ionomycin stimulationRNA sequencingRPMIT cell activationTCR signaling cascade

Identifiers

PMID36979867
PMCPMC10045592
OpenAlexW4324150572

What Socratic holds

Textfull text, public
LicenceCC BY
measurements read26
table measurements read3
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.