Evidence map›Paper›PMID 37031284›Full record

ArticleArchives of microbiology2023

Genomic insights into the c-di-GMP signaling and biofilm development in the saprophytic spirochete Leptospira biflexa.

Larissa Vasconcelos, Flávia Aburjaile, Lara Andrade, Artur Filipe Cancio, Núbia Seyffert, Eric R G R Aguiar, Paula Ristow

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. TheInfection and immunity · 2026
    Article
  2. Discovery of Novel c-di-GMP-Related Genes inPathogens (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Applied and environmental microbiology · 2025
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Larissa VasconcelosInstitute of Biology, Federal University of Bahia, Salvador, Bahia, Brazil.
Flávia AburjailePreventive Veterinary Medicine Department, Veterinary School, Federal University of Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Lara AndradeInstitute of Biology, Federal University of Bahia, Salvador, Bahia, Brazil.
Artur Filipe CancioInstitute of Biology, Federal University of Bahia, Salvador, Bahia, Brazil.
Núbia SeyffertInstitute of Biology, Federal University of Bahia, Salvador, Bahia, Brazil.
Eric R G R AguiarInstitute of Health Sciences, Federal University of Bahia, Salvador, Bahia, Brazil.
Paula RistowInstitute of Biology, Federal University of Bahia, Salvador, Bahia, Brazil. paula.ristow@ufba.br.ORCID http://orcid.org/0000-0001-8494-361X
Universidade Federal da Bahia · BRUniversidade Federal de Minas Gerais · BR

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 425526/2016-0Coordenação de Aperfeiçoamento de Pessoal de Nível Superior Finance Code 001Fundação de Amparo à Pesquisa do Estado da Bahia BOL1963/2019, Request n° 4756/2019Fundação de Amparo à Pesquisa do Estado da Bahia Nº 266/2018, BOL0501/2018National Institute of Science & Technology in Interdisciplinary and Transdisciplinary Studies in Ecology and Evolution (INCT IN-TREE), Brazil 23038.000776/2017-54
6 · The paper itself

Abstract

C-di-GMP is a bacterial second messenger with central role in biofilm formation. Spirochete bacteria from Leptospira genus present a wide diversity, with species of medical importance and environmental species, named as saprophytic. Leptospira form biofilms in the rat's reservoir kidneys and in the environment. Here, we performed genomic analyses to identify enzymatic and effector c-di-GMP proteins in the saprophytic biofilm-forming species Leptospira biflexa serovar Patoc. We identified 40 proteins through local alignments. Amongst them, 16 proteins are potentially functional diguanylate cyclases, phosphodiesterases, or hybrid proteins. We also identified nine effectors, including PilZ proteins. Enrichment analyses suggested that c-di-GMP interacts with cAMP signaling system, CsrA system, and flagella assembly regulation during biofilm development of L. biflexa. Finally, we identified eight proteins in the pathogen Leptospira interrogans serovar Copenhageni that share high similarity with L. biflexa c-di-GMP-related proteins. This work revealed proteins related to c-di-GMP turnover and cellular response in Leptospira and their potential roles during biofilm development.

Indexed as

Escherichia coli ProteinsLeptospiraBacteriaBacterial ProteinsBiofilmsCyclic GMPGene Expression Regulation, BacterialGenomicsSpirochaetalesBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPEscherichia coli ProteinsCyclic di-GMPDiguanylate cyclaseEffectorPhosphodiesteraseSecond messenger

Identifiers

PMID37031284
OpenAlexW4362721109

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.