Evidence map›Paper›PMID 37034817›Full record

ArticlebioRxiv : the preprint server for biology2023

Axial segmentation by iterative mechanical signaling.

Susan Wopat, Priyom Adhyapok, Bijoy Daga, Janice M Crawford, Brianna Peskin, James Norman, Jennifer Bagwell, Stephanie M Fogerson, Stefano Di Talia, Daniel P Kiehart and 2 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Susan WopatDepartment of Cell Biology, Duke University, Durham, North Carolina 27710, USA.
Priyom AdhyapokDepartment of Cell Biology, Duke University, Durham, North Carolina 27710, USA.
Bijoy DagaDepartment of Cell Biology, Duke University, Durham, North Carolina 27710, USA.
Janice M CrawfordDepartment of Biology, Duke University, Durham, North Carolina 27710, USA.
Brianna PeskinDepartment of Cell Biology, Duke University, Durham, North Carolina 27710, USA.
James NormanDepartment of Cell Biology, Duke University, Durham, North Carolina 27710, USA.
Jennifer BagwellDepartment of Cell Biology, Duke University, Durham, North Carolina 27710, USA.
Stephanie M FogersonDepartment of Biology, Duke University, Durham, North Carolina 27710, USA.
Stefano Di TaliaDepartment of Cell Biology, Duke University, Durham, North Carolina 27710, USA.
Daniel P KiehartDepartment of Biology, Duke University, Durham, North Carolina 27710, USA.
Patrick CharbonneauDepartment of Chemistry, Duke University, Durham, North Carolina 27708, USA.
Michel BagnatDepartment of Cell Biology, Duke University, Durham, North Carolina 27710, USA.
Duke University · USUniversity of California, Santa Barbara · US

Funding

MOLECULAR GENETICS OF CARDIAC CELL DIFFERENTIATIONR01HL054737 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COUGHLIN, SHAUN R. · 1996 to 2015
$5.4M
Morphogenesis: Biophysics and Genetics of Dorsal ClosureR35GM127059 · NIGMS · DUKE UNIVERSITY · PI DANIEL PETER KIEHART · 2018 to 2026
$4.5M
NHLBI NIH HHS R01 HL054737NIGMS NIH HHS R35 GM127059
6 · The paper itself

Abstract

In bony fishes, formation of the vertebral column, or spine, is guided by a metameric blueprint established in the epithelial sheath of the notochord. Generation of the notochord template begins days after somitogenesis and even occurs in the absence of somite segmentation. However, patterning defects in the somites lead to imprecise notochord segmentation, suggesting these processes are linked. Here, we reveal that spatial coordination between the notochord and the axial musculature is necessary to ensure segmentation of the zebrafish spine both in time and space. We find that the connective tissues that anchor the axial skeletal musculature, known as the myosepta in zebrafish, transmit spatial patterning cues necessary to initiate notochord segment formation, a critical pre-patterning step in spine morphogenesis. When an irregular pattern of muscle segments and myosepta interact with the notochord sheath, segments form non-sequentially, initiate at atypical locations, and eventually display altered morphology later in development. We determine that locations of myoseptum-notochord connections are hubs for mechanical signal transmission, which are characterized by localized sites of deformation of the extracellular matrix (ECM) layer encasing the notochord. The notochord sheath responds to the external mechanical changes by locally augmenting focal adhesion machinery to define the initiation site for segmentation. Using a coarse-grained mathematical model that captures the spatial patterns of myoseptum-notochord interactions, we find that a fixed-length scale of external cues is critical for driving sequential segment patterning in the notochord. Together, this work identifies a robust segmentation mechanism that hinges upon mechanical coupling of adjacent tissues to control patterning dynamics.

Identifiers

PMID37034817
PMCPMC10081202
OpenAlexW4361298691

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.