Evidence map›Paper›PMID 37036138›Full record

ArticleThe Plant journal : for cell and molecular biology2023

Sensory plastid-associated PsbP DOMAIN-CONTAINING PROTEIN 3 triggers plant growth- and defense-related epigenetic responses.

Ha Eun Jeh, Robersy Sanchez, Jesús Beltrán, Xiaodong Yang, Hardik Kundariya, Yashitola Wamboldt, Isaac Dopp, Alenka Hafner, Sally A Mackenzie

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. A newly identified photosystem II Subunit P geneFrontiers in plant science · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Ha Eun JehIntercollege Graduate Degree Program in Plant Biology, The Pennsylvania State University, University Park, PA, 16802, USA.
Robersy SanchezDepartments of Biology and Plant Science, The Pennsylvania State University, University Park, PA, 16802, USA.
Jesús BeltránDepartments of Biology and Plant Science, The Pennsylvania State University, University Park, PA, 16802, USA.
Xiaodong YangDepartments of Biology and Plant Science, The Pennsylvania State University, University Park, PA, 16802, USA.
Hardik KundariyaDepartments of Biology and Plant Science, The Pennsylvania State University, University Park, PA, 16802, USA.
Yashitola WamboldtMatMaCorp, 6400 Cornhusker Hwy #300, Lincoln, NE, 68507, USA.
Isaac DoppIntercollege Graduate Degree Program in Plant Biology, The Pennsylvania State University, University Park, PA, 16802, USA.
Alenka HafnerIntercollege Graduate Degree Program in Plant Biology, The Pennsylvania State University, University Park, PA, 16802, USA.
Sally A MackenzieDepartments of Biology and Plant Science, The Pennsylvania State University, University Park, PA, 16802, USA.ORCID 0000-0003-2077-5607
Pennsylvania State University · USUniversity of California, Riverside · USUniversity of Nebraska–Lincoln · US

Funding

Modeling stress-induced, de novo epiallele architecture in the model Arabidopsis as a tractable entrypointR01GM134056 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI MACKENZIE, SALLY A · 2019 to 2022
$1.3M
NIGMS NIH HHS R01 GM134056NIH HHS R01 GM134056-01
6 · The paper itself

Abstract

Sensory plastids are important in plant responses to environmental changes. Previous studies show that MutS HOMOLOG 1 (MSH1) perturbation in sensory plastids induces heritable epigenetic phenotype adjustment. Previously, the PsbP homolog DOMAIN-CONTAINING PROTEIN 3 (PPD3), a protein of unknown function, was postulated to be an interactor with MSH1. This study investigates the relationship of PPD3 with MSH1 and with plant environmental sensing. The ppd3 mutant displays a whole-plant phenotype variably altered in growth rate, flowering time, reactive oxygen species (ROS) modulation and response to salt, with effects on meristem growth. Present in both chloroplasts and sensory plastids, PPD3 colocalized with MSH1 in root tips but not in leaf tissues. The suppression or overexpression of PPD3 affected the plant growth rate and stress tolerance, and led to a heritable, heterogenous 'memory' state with both dwarfed and vigorous growth phenotypes. Gene expression and DNA methylome data sets from PPD3-OX and derived memory states showed enrichment in growth versus defense networks and meristem effects. Our results support a model of sensory plastid influence on nuclear epigenetic behavior and ppd3 as a second trigger, functioning within meristem plastids to recalibrate growth plasticity.

Indexed as

ArabidopsisArabidopsis ProteinsChloroplastsEpigenesis, GeneticGene Expression Regulation, PlantMutS DNA Mismatch-Binding ProteinPlastidsArabidopsis ProteinsMSH1 protein, ArabidopsisMutS DNA Mismatch-Binding Proteinchloroplastmethylomesalt tolerancetranscriptome

Identifiers

PMID37036138
PMCPMC10525003
OpenAlexW4363646087

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.