Evidence map›Paper›PMID 37066300›Full record

ArticlebioRxiv : the preprint server for biology2023

A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup.

Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day and 15 more

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 22 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 8 institutions in 3 countries.

Chengxiang QiuDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Beth K MartinDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Ian C WelshThe Jackson Laboratory, Bar Harbor, ME, USA.
Riza M DazaDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Truc-Mai LeBrotman Baty Institute for Precision Medicine, Seattle, WA, USA.
Xingfan HuangDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Eva K NicholsDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Megan L TaylorDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Olivia FultonDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Diana R O'DayBrotman Baty Institute for Precision Medicine, Seattle, WA, USA.
Anne Roshella GomesBrotman Baty Institute for Precision Medicine, Seattle, WA, USA.
Saskia IlcisinBrotman Baty Institute for Precision Medicine, Seattle, WA, USA.
Sanjay SrivatsanDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Xinxian DengDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, WA, USA.
Christine M DistecheDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, WA, USA.
William Stafford NobleDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Nobuhiko HamazakiDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Cecilia B MoensDivision of Basic Sciences, Fred Hutchinson Cancer Center, Seattle, WA, USA.
David KimelmanDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Junyue CaoLaboratory of Single-cell genomics and Population dynamics, The Rockefeller University, New York, NY, USA.
Alexander F SchierBiozentrum, University of Basel, Basel, Switzerland.
Malte SpielmannMax Planck Institute for Molecular Genetics, Berlin, Germany.
Stephen A MurrayThe Jackson Laboratory, Bar Harbor, ME, USA.
Cole TrapnellDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Jay ShendureDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
University of Washington · USBrotman Baty Institute · USHoward Hughes Medical Institute · USJackson Laboratory · USChristian-Albrechts-Universität zu Kiel · DEFred Hutch Cancer Center · USRockefeller University · USUniversity of Basel · CH

Funding

The Jackson Laboratory Knockout Mouse Production and Phenotyping Project (JAX KOMP2)UM1OD023222 · OD · JACKSON LABORATORY · PI ROBERT E BRAUN, Stephen A Murray · 2016 to 2026
$47.2M
UW 4-Dimensional Genomic Organization of Mammalian Embryogenesis CenterUM1HG011586 · NHGRI · UNIVERSITY OF WASHINGTON · PI DISTECHE, CHRISTINE M., NOBLE, WILLIAM STAFFORD · 2020 to 2024
$10.3M
Versatile, exponentially scalable methods for single cell molecular profilingR01HG010632 · NHGRI · UNIVERSITY OF WASHINGTON · PI Jay Ashok Shendure, Bruce Colston Trapnell · 2019 to 2026
$5.9M
X chromosome regulation and role in aneuploidyR35GM131745 · NIGMS · UNIVERSITY OF WASHINGTON · PI Christine M. Disteche · 2019 to 2026
$4.1M
NHGRI NIH HHS R01 HG010632NHGRI NIH HHS UM1 HG011586NIGMS NIH HHS R35 GM131745NIH HHS UM1 OD023222
6 · The paper itself

Abstract

The house mouse,

Identifiers

PMID37066300
PMCPMC10104014
OpenAlexW4362671298

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.