Evidence map›Paper›PMID 37076502›Full record

ArticleNature communications2023

Accounting for assay performance when estimating the temporal dynamics in SARS-CoV-2 seroprevalence in the U.S.

Bernardo García-Carreras, Matt D T Hitchings, Michael A Johansson, Matthew Biggerstaff, Rachel B Slayton, Jessica M Healy, Justin Lessler, Talia Quandelacy, Henrik Salje, Angkana T Huang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Bernardo García-CarrerasDepartment of Biology, University of Florida, Gainesville, FL, USA. bgarciacarreras@gmail.com.ORCID 0000-0002-0714-300X
Matt D T HitchingsDepartment of Biostatistics, University of Florida, Gainesville, FL, USA.ORCID 0000-0003-2327-3557
Michael A JohanssonCOVID-19 Response, US Centers for Disease Control and Prevention, Atlanta, GA, USA.ORCID 0000-0002-5090-7722
Matthew BiggerstaffCOVID-19 Response, US Centers for Disease Control and Prevention, Atlanta, GA, USA.
Rachel B SlaytonCOVID-19 Response, US Centers for Disease Control and Prevention, Atlanta, GA, USA.
Jessica M HealyCOVID-19 Response, US Centers for Disease Control and Prevention, Atlanta, GA, USA.
Justin LesslerDepartment of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Talia QuandelacyUniversity of Colorado Anschutz Medical Campus, Aurora, CO, USA.
Henrik SaljeDepartment of Genetics, University of Cambridge, Cambridge, UK.ORCID 0000-0003-3626-4254
Angkana T HuangDepartment of Genetics, University of Cambridge, Cambridge, UK.ORCID 0000-0002-9857-3506
Derek A T CummingsDepartment of Biology, University of Florida, Gainesville, FL, USA.ORCID 0000-0002-9437-1907
Centers for Disease Control and Prevention · USUniversity of Cambridge · GBUniversity of Florida · USUniversity of Colorado Anschutz Medical Campus · USUniversity of Florida Health · USUniversity of North Carolina at Chapel Hill · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reconstructing the incidence of SARS-CoV-2 infection is central to understanding the state of the pandemic. Seroprevalence studies are often used to assess cumulative infections as they can identify asymptomatic infection. Since July 2020, commercial laboratories have conducted nationwide serosurveys for the U.S. CDC. They employed three assays, with different sensitivities and specificities, potentially introducing biases in seroprevalence estimates. Using models, we show that accounting for assays explains some of the observed state-to-state variation in seroprevalence, and when integrating case and death surveillance data, we show that when using the Abbott assay, estimates of proportions infected can differ substantially from seroprevalence estimates. We also found that states with higher proportions infected (before or after vaccination) had lower vaccination coverages, a pattern corroborated using a separate dataset. Finally, to understand vaccination rates relative to the increase in cases, we estimated the proportions of the population that received a vaccine prior to infection.

Indexed as

COVID-19SARS-CoV-2Antibodies, ViralAsymptomatic InfectionsBiological AssayHumansSeroepidemiologic StudiesAntibodies, Viral

Identifiers

PMID37076502
PMCPMC10115837
OpenAlexW4366405458

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.