Evidence mapPaperPMID 37079385Full record

ArticleJCI insight2023

High-throughput proteomic analysis reveals systemic dysregulation in virally suppressed people living with HIV.

Nadira Vadaq, Yue Zhang, Wilhelm Ajw Vos, Albert L Groenendijk, Martinus Jt Blaauw, Louise E van Eekeren, Maartje Jacobs-Cleophas, Lisa van de Wijer, Jéssica Cristina Dos Santos, Muhammad Hussein Gasem and 6 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in JCI insight, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03994835 (2000 HIV Human Functional Genomics Partnership Program), which is not on this map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03994835 completednot on this map

2000 HIV Human Functional Genomics Partnership Program

Typeobservational_patient_registrySponsorRadboud University Medical CenterRan2019 to 2023Enrolled1,910ConditionsHIV Infections
3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 11 citations in OpenAlex.

  1. Metabolic and redox pathway dysregulation in HIV-associated coronary endothelial dysfunction.American journal of physiology. Heart and circulatory physiology · 2026
    Observational
  2. Article
  3. Article
  4. Proteomic Characterization of HIV Infection.Advances in experimental medicine and biology · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Observational
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 4 countries.

Nadira VadaqDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Yue ZhangDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.
Wilhelm Ajw VosDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Albert L GroenendijkDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Martinus Jt BlaauwDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Louise E van EekerenDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Maartje Jacobs-CleophasDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Lisa van de WijerDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Jéssica Cristina Dos SantosDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Muhammad Hussein GasemCenter for Tropical and Infectious Diseases, Faculty of Medicine, Diponegoro University, Dr. Kariadi Hospital, Semarang, Indonesia.
Leo Ab JoostenDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Mihai G NeteaDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Quirijn de MastDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Jingyuan FuDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.
André Jam van der VenDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Vasiliki MatzarakiDepartment of Internal Medicine, Radboudumc Center for Infectious Diseases, Radboud Institute of Health Science, Radboud University Medical Center, Nijmegen, Netherlands.
Radboud University Nijmegen · NLUniversity Medical Center Groningen · NLDiponegoro University · IDUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUNDPeople living with HIV (PLHIV) receiving antiretroviral therapy (ART) exhibit persistent immune dysregulation and microbial dysbiosis, leading to development of cardiovascular diseases (CVDs). We initially compared plasma proteomic profiles between 205 PLHIV and 120 healthy control participants (HCs) and validated the results in an independent cohort of 639 PLHIV and 99 HCs. Differentially expressed proteins (DEPs) were then associated to microbiome data. Finally, we assessed which proteins were linked with CVD development in PLHIV.METHODSProximity extension assay technology was used to measure 1,472 plasma proteins. Markers of systemic inflammation (C-reactive protein, D-dimer, IL-6, soluble CD14, and soluble CD163) and microbial translocation (IFABP) were measured by ELISA, and gut bacterial species were identified using shotgun metagenomic sequencing. Baseline CVD data were available for all PLHIV, and 205 PLHIV were recorded for development of CVD during a 5-year follow-up.RESULTSPLHIV receiving ART had systemic dysregulation of protein concentrations, compared with HCs. Most of the DEPs originated from the intestine and lymphoid tissues and were enriched in immune- and lipid metabolism-related pathways. DEPs originating from the intestine were associated with specific gut bacterial species. Finally, we identified upregulated proteins in PLHIV (GDF15, PLAUR, RELT, NEFL, COL6A3, and EDA2R), unlike most markers of systemic inflammation, associated with the presence and risk of developing CVD during 5-year follow-up.CONCLUSIONOur findings suggest a systemic dysregulation of protein concentrations in PLHIV; some proteins were associated with CVD development. Most DEPs originated from the gut and were related to specific gut bacterial species.TRIAL REGISTRATIONClinicalTrials.gov NCT03994835.FUNDINGAIDS-fonds (P-29001), ViiV healthcare grant (A18-1052), Spinoza Prize (NWO SPI94-212), European Research Council (ERC) Advanced grant (grant 833247), and Indonesia Endowment Fund for Education.

Indexed as

Cardiovascular DiseasesHIV InfectionsC-Reactive ProteinHumansInflammationProteomicsC-Reactive ProteinAIDS/HIVBioinformaticsCardiovascular diseaseInnate immunity

Identifiers

PMID37079385
PMCPMC10393229
OpenAlexW4366463960

What Socratic holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.