Evidence map›Paper›PMID 37081757›Full record

ArticleCancer medicine2023

Landscape of gene mutation in Chinese thyroid cancer patients: Construction and validation of lymph node metastasis prediction model based on clinical features and gene mutation marker.

Meng Wei, Rui Wang, Wanxue Zhang, Jing Zhang, Qiang Fang, Zheng Fang, Bin Liu, Yongxiang Li

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Meng WeiDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Rui WangDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Wanxue ZhangDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Jing ZhangDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Qiang FangDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Zheng FangDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Bin LiuDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Yongxiang LiDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.ORCID 0000-0002-6087-4135
Anhui Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesReporting the clinicopathological information of thyroid cancer (TC) patients from a central medical center of east China, and constructing the nomogram predicting lymph node metastasis (LNM).

methodsWe collected the patients who underwent thyroid cancer surgery in our institute from July 1, 2019 to July 31, 2021, a total of 253 subjects were enrolled. We used HiPure FFPE DNA Kit to extract DNA and RNApure FFPE Kit to extract RNA from the paraffin sections of tumor tissue, the extracted DNA samples and RNA samples were used for NGS sequencing. The clinical and pathological information of TCGA-THCA cohort was obtained as the validation cohort. Multivariate logistic regression analysis was performed to identify the independent prognostic factor, and the nomogram was subsequently constructed by "rms" R package.

resultsSecondary cases contained more mutation of BRAF (90.48% vs. 62.07%) and TERT (33.0% vs. 3.0%), as compared with primary cases. Primary patients with positive lymph node were younger (40.9 ± 10.8 vs. 45.3 ± 11.8, p = 0.0031) and contained advanced TI-RADS levels (4c: 22.8% vs. 8.3%, 5: 6.5% vs. 0/0%, p = 1.878e-03), as well as more RET genetic alteration (16.3% vs. 2.7%, p = 2.566e-03). We chose age, tumor diameter, RET fusion, and gender to construct the LNM predicting nomogram. Calibration plot, DCA curve, and the clinical impact plot verified the preferable prognostic value of the nomogram, with an AUC value of 0.724 (0.656-0.792). We successfully validated the prognostic value of the nomogram in TCGA-THCA cohort. RET fusion might impact the process of protein digestion and absorption, cytokine-cytokine receptor interaction, ECM-receptor interaction, focal adhesion.

conclusionWe provide a novel nomogram to predict the LNM for TC patients, including the features of patient's age, gender, tumor diameter, and RET alteration. Further studies from multiple medical centers are essential to validate the nomogram.

Indexed as

East Asian PeopleThyroid NeoplasmsHumansLymphatic MetastasisLymph NodesMutationNomogramslymph node metastasisnomogramRET genetic alterationthyroid cancer

Identifiers

PMID37081757
PMCPMC10278465
OpenAlexW4366602150

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.