Evidence map›Paper›PMID 37092537›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2023

Clinical and functional heterogeneity associated with the disruption of retinoic acid receptor beta.

Véronique Caron, Nicolas Chassaing, Nicola Ragge, Felix Boschann, Angelina My-Hoa Ngu, Elisabeth Meloche, Sarah Chorfi, Saquib A Lakhani, Weizhen Ji, Laurie Steiner and 45 more

Open access · greenAbstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The RaDiCo information system for rare disease cohorts.Orphanet journal of rare diseases · 2025
    Article
  5. Article
  6. AHuman mutation · 2024
    Article
  7. Functional genomics and small molecules in mitochondrial neurodevelopmental disorders.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

55 authors at 20 institutions in 9 countries.

Véronique CaronCHU Sainte-Justine Research Center, Montréal, QC, Canada.
Nicolas ChassaingService de Génétique Médicale, Hôpital Purpan CHU Toulouse, Toulouse, France; Centre de Référence des Affections Rares en Génétique Ophtalmologique CARGO, CHU Toulouse, Toulouse, France.
Nicola RaggeFaculty of Health and Life Sciences, Oxford Brookes University, Oxford, United Kingdom; West Midlands Regional Genetics Service, Birmingham Women's and Children's NHS Foundation Trust and Birmingham Health Partners, Birmingham, United Kingdom.
Felix BoschannCharité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Institute for Medical Genetics and Human Genetics, Berlin, Germany.
Angelina My-Hoa NguCHU Sainte-Justine Research Center, Montréal, QC, Canada.
Elisabeth MelocheCHU Sainte-Justine Research Center, Montréal, QC, Canada.
Sarah ChorfiCHU Sainte-Justine Research Center, Montréal, QC, Canada.
Saquib A LakhaniPediatric Genomic Discovery Program, Department of Pediatrics, Yale University School of Medicine, New Haven, CT.
Weizhen JiPediatric Genomic Discovery Program, Department of Pediatrics, Yale University School of Medicine, New Haven, CT.
Laurie SteinerDepartment of Pediatrics, University of Rochester Medical Center, Rochester, NY.
Julien MarcadierDepartment of Medical Genetics, Alberta Children's Hospital, Calgary, AB, Canada.
Philip R JansenDepartment of Human Genetics, Amsterdam UMC, Amsterdam, The Netherlands.
Laura A van de PolDepartment of Pediatric Neurology, Amsterdam UMC, location Vrije Universiteit, Amsterdam, The Netherlands.
Johanna M van HagenDepartment of Human Genetics, Amsterdam UMC, Amsterdam, The Netherlands.
Alvaro Serrano RussiDivision of Medical Genetics, Children's Hospital Los Angeles, Los Angeles, CA.
Gwenaël Le GuyaderService de Génétique médicale, CHU de Poitiers, Poitiers, France.
Magnus NordenskjöldDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden; Department of Clinical genetics, Karolinska University Hospital, Stockholm, Sweden.
Ann NordgrenDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden; Department of Clinical genetics, Karolinska University Hospital, Stockholm, Sweden.
Britt-Marie AnderlidDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden; Department of Clinical genetics, Karolinska University Hospital, Stockholm, Sweden.
Julie PlaisanciéService de Génétique Médicale, Hôpital Purpan CHU Toulouse, Toulouse, France; Centre de Référence des Affections Rares en Génétique Ophtalmologique CARGO, CHU Toulouse, Toulouse, France.
Corinna StoltenburgDepartment of Pediatric Neurology, Charité Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany.
Denise HornCharité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Institute for Medical Genetics and Human Genetics, Berlin, Germany.
Anne DrenckhahnDepartment of Pediatric Neurology, Charité Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany.
Fadi F HamdanCHU Sainte-Justine Research Center, Montréal, QC, Canada; Department of Pediatrics, Université de Montréal, Montréal, QC, Canada.
Mathilde LefebvreUF de fœtopathologie, Hôpital Robert Debré, Paris, France.
Tania Attie-BitachService de médecine génomique des maladies rares, Hôpital Universitaire Necker-Enfants malade, Paris, France.
Peggy ForeyCentre Hospitalier d'Angoulême, Angoulême, France.
Vasily SmirnovExploration de la Vision et Neuro-Ophtalmologie, Hôpital Roger-Salengro, CHU de Lille, Lille, France.
Françoise ErnouldService d'ophtalmologie, Hôpital Claude Huriez, CHU de Lille, Lille, France.
Marie-Line JacquemontMedical Genetics, CHU La Reunion, Reunion Island, France.
Sarah GrottoUnité de Génétique Clinique, Hôpital Robert Debré, Paris, France.
Alberto AlcantudServicio de Pediatría, Hospital de Sagunto, Valencia, Spain.
Alicia CoretServicio de Pediatría, Hospital de Sagunto, Valencia, Spain.
Rosario Ferrer-AvarguesMedical Genetics Unit, Sistemas Genómicos, Paterna, Spain.
Siddharth SrivastavaDepartment of Neurology, Rosamund Stone Zander Translational Neuroscience Center, Boston Children's Hospital, Boston, MA.
Catherine Vincent-DelormeClinique de Génétique "Guy Fontaine," Hôpital Jeanne de Flandre, Lille, France.
Shelby RomoserDivision of Medical Genetics and Genomics, Stead Family Department of Pediatrics, University of Iowa Hospitals and Clinics, Iowa City, IA.
Nicole SafinaDivision of Medical Genetics and Genomics, Stead Family Department of Pediatrics, University of Iowa Hospitals and Clinics, Iowa City, IA.
Dimah SaadeDivision of Child Neurology, Stead Family Department of Pediatrics, Department of Neurology, UI Carver College of Medicine, Iowa City, IA.
James R LupskiDepartment of Pediatrics and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Texas Children's Hospital, Houston, TX; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX.
Daniel G CalameDepartment of Pediatrics and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Texas Children's Hospital, Houston, TX; Section of Pediatric Neurology and Developmental Neuroscience, Department of Pediatrics, Baylor College of Medicine, Houston, TX.
David GenevièveUniversité Montpellier, INSERM U1183, Génétique clinique, CHU de Montpellier, Montpellier, France.
Nicolas ChatronService de Génétique, Hospices Civils de Lyon, Lyon, France; Institut Neuromyogène, CNRS UMR 5310 - INSERM U1217, Université Claude Bernard Lyon 1, Lyon, France.
Caroline Schluth-BolardService de Génétique, Hospices Civils de Lyon, Lyon, France.
Kenneth A MyersDivision of Neurology, Department of Pediatrics, McGill University Health Centre, Montreal, QC, Canada.
William B DobynsDepartment of Pediatrics, University of Minnesota, Minneapolis, MN.
Patrick CalvasService de Génétique Médicale, Hôpital Purpan CHU Toulouse, Toulouse, France; Centre de Référence des Affections Rares en Génétique Ophtalmologique CARGO, CHU Toulouse, Toulouse, France.
DDD StudyWellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom.
Caroline SalmonChildren's & Adolescent Services, Royal Surrey County Hospital, Guildford, Surrey, United Kingdom.
Richard HoltFaculty of Health and Life Sciences, Oxford Brookes University, Oxford, United Kingdom.
Frances ElmslieSt George's University Hospitals NHS Foundation Trust, London, United Kingdom.
Marc AllaireBerkeley Center for Structural Biology, Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA.
Daniil M PrigozhinBerkeley Center for Structural Biology, Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA.
André TremblayCHU Sainte-Justine Research Center, Montréal, QC, Canada; Department of Obstetrics & Gynecology, Université de Montréal, Montréal, QC, Canada; Department of Biochemistry and Molecular Medecine, Université de Montréal, Montréal, QC, Canada. Electronic address: andre.tremblay.1@umontreal.ca.
Jacques L MichaudCHU Sainte-Justine Research Center, Montréal, QC, Canada; Department of Pediatrics, Université de Montréal, Montréal, QC, Canada; Department of Neurosciences, Université de Montréal, Montréal, QC, Canada. Electronic address: jacques.michaud.med@ssss.gouv.qc.ca.
Centre Hospitalier Universitaire Sainte-Justine · CAHumboldt-Universität zu Berlin · DECentre Hospitalier Universitaire de Toulouse · FRKarolinska University Hospital · SEAmsterdam University Medical Centers · NLBaylor College of Medicine · USCentre Hospitalier Universitaire de Lille · FRHôpital Robert-Debré · FRHospital de Sagunto · ESLawrence Berkeley National Laboratory · USUniversity of Iowa Hospitals and Clinics · USYale University · USAlberta Children's Hospital · CABirmingham Women’s and Children’s NHS Foundation Trust · GBBoston Children's Hospital · USCentre Hospitalier d'Angoulême · FRCentre Hospitalier Universitaire de Poitiers · FRChild Neurology Associates · USChildren's Hospital of Los Angeles · USHôpital Jeanne de Flandre · FR

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Frequency of variants of unknown significance by ancestry groups in the All of Us Research Program cohortU01HG011758 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI RICHARD A GIBBS, JAMES R. LUPSKI · 2021 to 2026
$13.8M
MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
STRUCTURAL VARIATION IN NEUROLOGICAL DISEASER35NS105078 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI LUPSKI, JAMES R. · 2018 to 2025
$6.0M
EMERGING AND TROPICAL INFECTIOUS DISEASEST32AI007526 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI SOONG, LYNN · 1997 to 2025
$3.1M
Investigating the Genetic Landscape of Cerebral PalsyK23NS119666 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI SRIVASTAVA, SIDDHARTH · 2021 to 2025
$1.1M
Department of HealthNCATS NIH HHS UL1 TR001863NHGRI NIH HHS U01 HG011758NIAID NIH HHS T32 AI007526NIGMS NIH HHS T32 GM007526NINDS NIH HHS K23 NS119666NINDS NIH HHS R35 NS105078Wellcome TrustWellcome Trust WT098051
6 · The paper itself

Abstract

purposeDominant variants in the retinoic acid receptor beta (RARB) gene underlie a syndromic form of microphthalmia, known as MCOPS12, which is associated with other birth anomalies and global developmental delay with spasticity and/or dystonia. Here, we report 25 affected individuals with 17 novel pathogenic or likely pathogenic variants in RARB. This study aims to characterize the functional impact of these variants and describe the clinical spectrum of MCOPS12.

methodsWe used in vitro transcriptional assays and in silico structural analysis to assess the functional relevance of RARB variants in affecting the normal response to retinoids.

resultsWe found that all RARB variants tested in our assays exhibited either a gain-of-function or a loss-of-function activity. Loss-of-function variants disrupted RARB function through a dominant-negative effect, possibly by disrupting ligand binding and/or coactivators' recruitment. By reviewing clinical data from 52 affected individuals, we found that disruption of RARB is associated with a more variable phenotype than initially suspected, with the absence in some individuals of cardinal features of MCOPS12, such as developmental eye anomaly or motor impairment.

conclusionOur study indicates that pathogenic variants in RARB are functionally heterogeneous and associated with extensive clinical heterogeneity.

Indexed as

MicrophthalmosReceptors, Retinoic AcidHumansRetinoidsReceptors, Retinoic Acidretinoic acid receptor betaRetinoidsDystoniaGlobal developmental delayMicrophthalmiaRetinoic acidRetinoic acid receptor beta

Identifiers

PMID37092537
PMCPMC10757562
OpenAlexW4366496697

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.