Evidence map›Paper›PMID 37093039›Full record

ArticlemSphere2023

Bacteria and Archaea Regulate Particulate Organic Matter Export in Suspended and Sinking Marine Particle Fractions.

Choaro D Dithugoe, Oliver K I Bezuidt, Emma L Cavan, William P Froneman, Sandy J Thomalla, Thulani P Makhalanyane

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Choaro D DithugoeSouthern Ocean Carbon-Climate Observatory (SOCCO), Council of Scientific & Industrial Research (CSIR), Rosebank, Cape Town, South Africa.ORCID 0000-0003-2540-7758
Oliver K I BezuidtSARChI Chair: Marine Microbiomics, microbiome@UP, Department of Biochemistry, Genetics and Microbiology, University of Pretoria (UP), Hatfield, Pretoria, South Africa.
Emma L CavanImperial College London, Berks, Silwood Park, Berkshire, United Kingdom.
William P FronemanSARChI Chair: Marine Ecosystems and Resources, Department of Entomology & Zoology, Rhodes University (RU), Makhanda, Eastern Cape, South Africa.
Sandy J ThomallaSouthern Ocean Carbon-Climate Observatory (SOCCO), Council of Scientific & Industrial Research (CSIR), Rosebank, Cape Town, South Africa.
Thulani P MakhalanyaneSARChI Chair: Marine Microbiomics, microbiome@UP, Department of Biochemistry, Genetics and Microbiology, University of Pretoria (UP), Hatfield, Pretoria, South Africa.ORCID 0000-0002-8173-1678
Rhodes University · ZAUniversity of Pretoria · ZACouncil for Scientific and Industrial Research · ZAImperial College London · GB

Funding

Department of Science and Technology, Republic of South Africa (DST) 0182/2017National Research Foundation (NRF) 110729National Research Foundation (NRF) 148867
6 · The paper itself

Abstract

The biological carbon pump (BCP) in the Southern Ocean is driven by phytoplankton productivity and is a significant organic matter sink. However, the role of particle-attached (PA) and free-living (FL) prokaryotes (bacteria and archaea) and their diversity in influencing the efficiency of the BCP is still unclear. To investigate this, we analyzed the metagenomes linked to suspended and sinking marine particles from the Sub-Antarctic Southern Ocean Time Series (SOTS) by deploying a Marine Snow Catcher (MSC), obtaining suspended and sinking particulate material, determining organic carbon and nitrogen flux, and constructing metagenome-assembled genomes (MAGs). The suspended and sinking particle-pools were dominated by bacteria with the potential to degrade organic carbon. Bacterial communities associated with the sinking fraction had more genes related to the degradation of complex organic carbon than those in the suspended fraction. Archaea had the potential to drive nitrogen metabolism via nitrite and ammonia oxidation, altering organic nitrogen concentration. The data revealed several pathways for chemoautotrophy and the secretion of recalcitrant dissolved organic carbon (RDOC) from CO

Indexed as

ArchaeaSeawaterBacteriaCarbonDissolved Organic MatterParticulate MatterCarbonDissolved Organic MatterParticulate Mattercarbon exportfunctional capacitymarine fractionsMarine Snow Catchermetagenomicsparticulate organic matterprokaryotesSouthern Ocean

Identifiers

PMID37093039
PMCPMC10286711
OpenAlexW4366822259

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.