Evidence map›Paper›PMID 37097196›Full record

ReviewMicrobiology spectrum2023

High-Throughput Profiling of Candida auris Isolates Reveals Clade-Specific Metabolic Differences.

Philipp Brandt, Mohammad H Mirhakkak, Lysett Wagner, Dominik Driesch, Anna Möslinger, Pauline Fänder, Sascha Schäuble, Gianni Panagiotou, Slavena Vylkova

Open access · goldAbstract readReview
In one paragraph

Review in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Defining thebioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Review
  5. Journal of fungi (Basel, Switzerland) · 2026
    Review
  6. Review
  7. Dielectrophoretic Profiling ofACS measurement science au · 2025
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Vacuolar Proteases ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  13. Article
  14. Diosgenin producingComputational and structural biotechnology journal · 2025
    Article
  15. The multidrug-resistantCurrent research in microbial sciences · 2025
    Review
  16. Article
  17. Article
  18. What makesAntimicrobial agents and chemotherapy · 2024
    Article
  19. Review
  20. Metabolic Patterns of Fluconazole Resistant and SusceptibleJournal of fungi (Basel, Switzerland) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Philipp Brandt *Septomics Research Center, Friedrich Schiller University, and Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.
Mohammad H Mirhakkak *Systems Biology and Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.
Lysett WagnerSeptomics Research Center, Friedrich Schiller University, and Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.
Dominik DrieschBioControl Jena, Jena, Germany.
Anna MöslingerSeptomics Research Center, Friedrich Schiller University, and Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.
Pauline FänderSeptomics Research Center, Friedrich Schiller University, and Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.
Sascha SchäubleSystems Biology and Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.
Gianni PanagiotouSystems Biology and Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.
Slavena VylkovaSeptomics Research Center, Friedrich Schiller University, and Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.ORCID 0000-0002-0051-4664
Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Knöll-Institut (HKI) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Candida auris, a multidrug-resistant human fungal pathogen that causes outbreaks of invasive infections, emerged as four distinct geographical clades. Previous studies identified genomic and proteomic differences in nutrient utilization on comparison to Candida albicans, suggesting that certain metabolic features may contribute to C. auris emergence. Since no high-throughput clade-specific metabolic characterization has been described yet, we performed a phenotypic screening of C. auris strains from all 4 clades on 664 nutrients, 120 chemicals, and 24 stressors. We identified common and clade- or strain-specific responses, including the preferred utilization of various dipeptides as nitrogen source and the inability of the clade II isolate AR 0381 to withstand chemical stress. Further analysis of the metabolic properties of C. auris isolates showed robust growth on intermediates of the tricarboxylic acid cycle, such as citrate and succinic and malic acids. However, there was reduced or no growth on pyruvate, lactic acid, or acetate, likely due to the lack of the monocarboxylic acid transporter Jen1, which is conserved in most pathogenic

Indexed as

CandidiasisAntifungal AgentsCandidaCandida albicansCandida aurisDipeptidesHumansMicrobial Sensitivity TestsProteomicsAntifungal AgentsDipeptidesCandida auriscarboxylic acidsdicarboxylic acidsdipeptidesdipeptide transportJen2metabolismphenotypic profiling

Identifiers

PMID37097196
PMCPMC10269459
OpenAlexW4366984096

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.